Transcript Information: R_Transcript_457780.p1


Annotated TAIR IDAT5G40580.1
Annotated Gene Name20S proteasome beta subunit PBB2
Annotated Gene Symbol(s)PBB2
Annotation TypeOrtholog
Chromosome Positionchr5:16248511-16250451 | Reverse length=274
E-Value1.5E-85
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.098134198681284
Replicate 20.22576667114299
Replicate 30.12315450320512
Condition 2: 8 Hour
Replicate 10.26328887040049
Replicate 20.24043958969017
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.11767583164999


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_457780.p1 GENE.R_Transcript_457780~~R_Transcript_457780.p1 ORF type:internal len:186 (+),score=-20.15,Proteasome|PF00227.22|7.9e-44 R_Transcript_457780:2-556(+)
GTCGTGCTTGGCGCTGATACGCGCGCCACCGAAGGCAGCATCGTCGCCGATAAGAACTGTGCCAAGATTCATTACATCAGCAAATACATCTATTGCTGCGGTGCCGGTACGGCGGCAGATACTGAGAATGTCACCGACGTGATCTCGAGTCAGCTGGAGTTGCATCGTCTTGCGACGGGCCAAGAGCCGCGTGTCAACACTGCGATGACACGCTTGAAGCAGAAGTTGTTCCAGTACCAGGGTCACATCTCGGCTGCGCTCGTGCTCGGCGGCGTCGATTCCGAGGGCTCGCACCTTTACACTGTCTATCCGCACGGCTCGGTCGACCGTCTGCCATACGCGACCATGGGCTCCGGCTCGCTCGCGGCCATGGCCATCCTCGAGAACGGCTACAAGGATGACATGAACGAGGCCGATGCGATCGAACTTGTGTCGCAAGCGATCCAATCGGGTATCTTCAATGATCTCGGCTCCGGCAGCAATGTGGACATCACTGTGATCAAGCGTGGTGCGACGTTGGGCGAGAGCGAGGTGAAGTACCTTCGCAACTATCTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_457780.p1 GENE.R_Transcript_457780~~R_Transcript_457780.p1 ORF type:internal len:186 (+),score=-20.15,Proteasome|PF00227.22|7.9e-44 R_Transcript_457780:2-556(+)
VVLGADTRATEGSIVADKNCAKIHYISKYIYCCGAGTAADTENVTDVISSQLELHRLATGQEPRVNTAMTRLKQKLFQYQGHISAALVLGGVDSEGSHLYTVYPHGSVDRLPYATMGSGSLAAMAILENGYKDDMNEADAIELVSQAIQSGIFNDLGSGSNVDITVIKRGATLGESEVKYLRNYL

Click here to download the sequence:
Link to NCBI Protein BLAST