Transcript Information: R_Transcript_45780.p1


Annotated TAIR IDAT5G51330.1
Annotated Gene NameSWITCH1
Annotated Gene Symbol(s)SWI1, DYAD
Annotation TypeOrtholog
Chromosome Positionchr5:20858752-20861680 | Reverse length=639
E-Value6.1E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 145.972519671667
Replicate 237.134761140005
Replicate 341.509569525947
Condition 2: 8 Hour
Replicate 139.238218362666
Replicate 246.31896952817
Replicate 346.562827243601
Condition 3: 24 Hour
Replicate 142.671576477581
Replicate 234.726758563735
Replicate 340.750555775761


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_45780.p1 GENE.R_Transcript_45780~~R_Transcript_45780.p1 ORF type:5prime_partial len:644 (+),score=127.83 R_Transcript_45780:1-1932(+)
ATTATTTCCCTCGCCTCTCCCTCCTTCGCCCAATCTCTCTCTTCCTATCCTCCTCCTTCTTCTTCTCTCTCCTCCGTCGGTCCATCCCACTGTTCAGCTACTCCACAACACTCAGATTCAAAACGCACCGTTTTATCATCATCAAGGTTAAAGGTGGAAGGAAGAATGAGGGTAATGCCGAAAAGGCTAAACATATTGGGATCAGTAGGAGATGCTGCTCAAAGCACTCCTTTGCCTGCACGTCTCGCTATCACTCCCAAATTATCAATTCACGATATTGAAGAGGGTGAATTTTATGAGATTGATCATTCCGGGCTCCCTCCTGGAATCCCTGCCATGCTTCGTGTCGTTCGTGTTGTTCTGGTAACTTGCAAAGGTAAGCTGGGTGTGTCTTTGAGATATCCTAGCTCTCAGTCCCTTGAAGCATGCTTTAGCAATCCTGAGCTTGTAACTCGTAGGGCCAAAGTGTTCCCTCAATTGGATGAGAAAGTCGACATCCCAGCAAGGCTTGCTGTTAAGGTTCTTGGGCGTCAAATCACATCTGAGGAATTTGTGGTGTCCAAATACTCCAAGTTCTTCTGGGTGAATAATTGTTTTAAGATGGAGCAGGTACTCTCGCCCATATCAGTTTGTTATGCTGATAATAACGCAGCAGATTTTCAAGCTAAGAATGGGACGTTGTCAGTCAGACTCCGATGCCATGAACCCAAGGGCAAGGATACTAAACATAAAAAAGGTGTCTATTGTCTGGAGCCCAGCTCCCATCAAGAGACATTGAGTGAATCGTACAGAGAAGTTAAAATGACTGTAAAAGAAGAGGGAAATGATGAAATGAGTGACAAAAAAATTATTCAATACACCAGGAAGAGGAAGCGTGGTAGACCTTCTCTTGGTCAAAACCAGAAGAGAAACCATAGTCCAAAGCCTAAGCCTATTGAGCAGAAAGCTGTAATCAAGGTAAAGAAAGAGCACGAATATGTAGACAGGTGGCCTGTGAAGAGGTATGAAGCAGCAGCAAAGGACTTGTCAGAGGTTTTAAAGGCTAAAGGGGCAGTTCATGGGAACCCAATTTCACGTTTTGAGCTGAGGGCTCTAGCTAGGAATACAATTGGTGATACGGGCCTGTTAGACCATCTGCTGAAGCACCTTGCAGGGAAAGTGGTTCCTGGTGGCAATGAACGCCTGCGTAGGCGGTGTGATCCAGAAGGTAAAATGGAGTACTGGCTTGAAAGTGCAGATCTTGCTGATATAAGGAAGGAAGCTGGAATACAAGATCCATACTGGATACCTCCCCCCGGATGGAAGCCTGGAGATTGCCTTGGCACACATGATTGCCGTTGCGATCAACAAGTAAGGCTACTTAAGGAAGAATTGAGCAGCATGAGAAGACACATAGAAGAGCTGAAATCCAAGAATAATCATGAGCAGGCAATCACTGTAGTACAGCCAGGTAGTGTGGCATCTTTTGTGAGGCTGAGCAGTGGTGATCTGGATGTGACAGCCTCAAAGGAAATATATGAGGCTCTGGTGAAGAAGAAATCTATTGTGGAGGAGCAACTTTGTGCAATTTCAAAATCTTTGCTAGCACTGGAGGAACACATGAAAACGCTATCTTACCAAGAAGCAGCATCAACCGAAAACCCTCTTCTGCTAACAGCCCCTCAGAGTTTACGAGGTGAAGAGATGAACGAGGTAAGCGCTAATGGGATAGAAGACTTTGCTGAAGCAGCAGCAGGAGAACTAAGTGAAAGTAATTTTGAAGAAATCGTGAGAGAGAGACAACCGAGGAGGACATCATTGTTGAAACTCAAACGGTGCAGGCAGCCTGATCCCAAAAGTAACTTATCATCTCAAGCAGTGAGTTATCCAGCGGATGATCTCATAGCTCTGACCCCGGCTTCAGGATCTCCCCTCTCGTCCACCACCTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_45780.p1 GENE.R_Transcript_45780~~R_Transcript_45780.p1 ORF type:5prime_partial len:644 (+),score=127.83 R_Transcript_45780:1-1932(+)
IISLASPSFAQSLSSYPPPSSSLSSVGPSHCSATPQHSDSKRTVLSSSRLKVEGRMRVMPKRLNILGSVGDAAQSTPLPARLAITPKLSIHDIEEGEFYEIDHSGLPPGIPAMLRVVRVVLVTCKGKLGVSLRYPSSQSLEACFSNPELVTRRAKVFPQLDEKVDIPARLAVKVLGRQITSEEFVVSKYSKFFWVNNCFKMEQVLSPISVCYADNNAADFQAKNGTLSVRLRCHEPKGKDTKHKKGVYCLEPSSHQETLSESYREVKMTVKEEGNDEMSDKKIIQYTRKRKRGRPSLGQNQKRNHSPKPKPIEQKAVIKVKKEHEYVDRWPVKRYEAAAKDLSEVLKAKGAVHGNPISRFELRALARNTIGDTGLLDHLLKHLAGKVVPGGNERLRRRCDPEGKMEYWLESADLADIRKEAGIQDPYWIPPPGWKPGDCLGTHDCRCDQQVRLLKEELSSMRRHIEELKSKNNHEQAITVVQPGSVASFVRLSSGDLDVTASKEIYEALVKKKSIVEEQLCAISKSLLALEEHMKTLSYQEAASTENPLLLTAPQSLRGEEMNEVSANGIEDFAEAAAGELSESNFEEIVRERQPRRTSLLKLKRCRQPDPKSNLSSQAVSYPADDLIALTPASGSPLSSTTS*

Click here to download the sequence:
Link to NCBI Protein BLAST