Transcript Information: R_Transcript_45784.p1


Annotated TAIR IDAT5G64200.1
Annotated Gene NameOrtholog of human splicing factor SC35
Annotated Gene Symbol(s)ATSC35, SC35, At-SC35
Annotation TypeOrtholog
Chromosome Positionchr5:25681849-25683553 | Reverse length=303
E-Value1.1E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 142.976187919506
Replicate 233.296371928831
Replicate 340.599628202136
Condition 2: 8 Hour
Replicate 145.865314192228
Replicate 255.818768476691
Replicate 362.040579583114
Condition 3: 24 Hour
Replicate 169.130412062527
Replicate 252.01090902554
Replicate 361.579587066868


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_45784.p1 GENE.R_Transcript_45784~~R_Transcript_45784.p1 ORF type:complete len:268 (+),score=36.05,RRM_1|PF00076.18|1.6e-20,RRM_6|PF14259.2|2.6e-12,RRM_5|PF13893.2|1.9e-07 R_Transcript_45784:131-934(+)
ATGTCGCACTTTGGAAGAGCAGGTCCTCCTGATATCGCTGACACCTACTCTCTTCTCGTTCTCAACATCACTTTCCGAACTACGCCAGATGATTTGTTTCCGTTGTTCGATAAGTACGGTAAAGTCGTCGACATCTTCATCCCTAGAGACCGAAGGACTGGCGAATCACGAGGGTTTGCATTTGTCCGGTACAAGTATGCTGATGAGGCGCAGAAGGCTGTTGATAGGCTTGATGGGAGAGTGGTGGATGGCAGGGAAATAGCGGTTCAGTTTGCAAAATATGGTCCTAATGCTGAGAGGATTCATAAAGGAAGGATTGTGGAGCCTATTTCTAGGGTCAAGAGCCCAAGACGGAGGCATCGAGATGATTACTACAGAGATAGGGACTATCACAGAAGAAGAAGTCGCAGTAGAAGCTGGGACAGATATGATCGTGTCAGATATCGTGAAAGGGATAGAGATTATCGCCATCGGAGCAGGAGCCGTAGTTACAGTCCTGATTACTATCGAGGTCGTGGAAGAGATCGTTATGATGATGAAAGGAGCCGTCGAAGCAGATCATATGAGAGTGCTTCTCCAAGACGTAGTCTCAGTAGAAGCTTATCACCTCGCAGGAGTGTTTCACCGCGTAGGAGCCCTTCTCCTGATAGTCCATCTCGTTCAAGGAGTGGGAGTCCAGATAACCGCAGCCTGAATGGACGTTCTGTTAGTCCTCGCCGGTCTGCATCTCCCAAGGATGTTTCACCACATGACAGGGCAGTAGGTTTGCGTAGCCCCTCTCCTCGCAGATCAGATGATGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_45784.p1 GENE.R_Transcript_45784~~R_Transcript_45784.p1 ORF type:complete len:268 (+),score=36.05,RRM_1|PF00076.18|1.6e-20,RRM_6|PF14259.2|2.6e-12,RRM_5|PF13893.2|1.9e-07 R_Transcript_45784:131-934(+)
MSHFGRAGPPDIADTYSLLVLNITFRTTPDDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAVDRLDGRVVDGREIAVQFAKYGPNAERIHKGRIVEPISRVKSPRRRHRDDYYRDRDYHRRRSRSRSWDRYDRVRYRERDRDYRHRSRSRSYSPDYYRGRGRDRYDDERSRRSRSYESASPRRSLSRSLSPRRSVSPRRSPSPDSPSRSRSGSPDNRSLNGRSVSPRRSASPKDVSPHDRAVGLRSPSPRRSDDE*

Click here to download the sequence:
Link to NCBI Protein BLAST