Transcript Information: R_Transcript_458211.p1


Annotated TAIR IDAT3G49910.1
Annotated Gene NameTranslation protein SH3-like family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18504311-18504751 | Forward length=146
E-Value5E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.63378336648329
Replicate 20.87484585067909
Replicate 30.63629826655979
Condition 2: 8 Hour
Replicate 10
Replicate 20.1552839016749
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.30632304014691
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_458211.p1 GENE.R_Transcript_458211~~R_Transcript_458211.p1 ORF type:3prime_partial len:144 (+),score=11.34,Ribosomal_L26|PF16906.1|1.5e-36,KOW|PF00467.25|3.5e-08,KOW|PF00467.25|4.2e+03 R_Transcript_458211:23-430(+)
ATGGGCAAGTTTAACACTGCCGTCACGGAGAGCCGTCGCAAGAACCGCAAGGCTCACTTCTCGGCCGACTCGACCTCGCGGCGAAAGCGCATGTCTGCTCCTCTGAGCGATGAGCTGCAGAAGAAATACAACGTGCGCTCGCTGCCCATCCGCAAGGATGATGAGGTTCAGATTGTCCGCGGCACGTTCAAGAACCGCGATGGCAAGGTCACTCAGGTCTACCGCAAGAAGTACATCATCCACATTGAGCGCATTACCCGCGAGAAGAACAACGGCGCCACTGTGAACCTCGGCGTTGACCCCAGCAAAGTTGTGATCACTAAGCTGCACCTGGACCCTGACCGCAAGCAGCTGCTGGAGCGCAAGAACCGCAAGAAGGCCACGGACAAGAACGCCGACAAGGTCAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_458211.p1 GENE.R_Transcript_458211~~R_Transcript_458211.p1 ORF type:3prime_partial len:144 (+),score=11.34,Ribosomal_L26|PF16906.1|1.5e-36,KOW|PF00467.25|3.5e-08,KOW|PF00467.25|4.2e+03 R_Transcript_458211:23-430(+)
MGKFNTAVTESRRKNRKAHFSADSTSRRKRMSAPLSDELQKKYNVRSLPIRKDDEVQIVRGTFKNRDGKVTQVYRKKYIIHIERITREKNNGATVNLGVDPSKVVITKLHLDPDRKQLLERKNRKKATDKNADKVK

Click here to download the sequence:
Link to NCBI Protein BLAST