Transcript Information: R_Transcript_458383.p1


Annotated TAIR IDAT5G52140.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21184566-21186872 | Reverse length=280
E-Value5E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.25410093001347
Replicate 30.2062683025044
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_458383.p1 GENE.R_Transcript_458383~~R_Transcript_458383.p1 ORF type:internal len:88 (+),score=13.69,zf-RING_11|PF17123.1|2.6e-08,zf-RING_2|PF13639.2|1.5e-07,zf-C3HC4|PF00097.21|5.9e-07,zf-rbx1|PF12678.3|1.3e-05 R_Transcript_458383:3-263(+)
CTTTCAGTCATCATCGACCGAGTCCTCGTGCACCGTGATCGAGTCGCCGTCAACACCGCCCGAGTGGGGGCCACAGTGCCGGCTGACGTGGAGGCTATAAAGAGACTAAGGAGGGTAAATGGTGGAGAGTACTTGGATCAAGAGGAGGATGAGAAGTGTAGGATATGCCTTGACGTGCTGGCCAAGAAAGGGGAGGATCAAGTCACGTGCCTGCCGTGTGACCATGCTTTTCATGAGGATTGCATTGTTAAGTGGTTGAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_458383.p1 GENE.R_Transcript_458383~~R_Transcript_458383.p1 ORF type:internal len:88 (+),score=13.69,zf-RING_11|PF17123.1|2.6e-08,zf-RING_2|PF13639.2|1.5e-07,zf-C3HC4|PF00097.21|5.9e-07,zf-rbx1|PF12678.3|1.3e-05 R_Transcript_458383:3-263(+)
LSVIIDRVLVHRDRVAVNTARVGATVPADVEAIKRLRRVNGGEYLDQEEDEKCRICLDVLAKKGEDQVTCLPCDHAFHEDCIVKWLN

Click here to download the sequence:
Link to NCBI Protein BLAST