Transcript Information: R_Transcript_45932.p1


Annotated TAIR IDAT5G38660.1
Annotated Gene Nameacclimation of photosynthesis to environment
Annotated Gene Symbol(s)APE1
Annotation TypeOrtholog
Chromosome Positionchr5:15473285-15475497 | Reverse length=286
E-Value8.4E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.174427992125
Replicate 21.8257652535911
Replicate 31.4227787326803
Condition 2: 8 Hour
Replicate 11.5208611768475
Replicate 22.0833119727813
Replicate 31.4656580004039
Condition 3: 24 Hour
Replicate 12.2815212151756
Replicate 22.3288161561479
Replicate 32.9908664789549


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_45932.p1 GENE.R_Transcript_45932~~R_Transcript_45932.p1 ORF type:complete len:161 (+),score=15.94 R_Transcript_45932:119-601(+)
ATGCCTCCAACTCTAAGAACAGCAGCTCCAATTTGTGCTTCTTGTAATCACTTTCTCTCTCCTCATAAGCACCACTACCAGCAATCCTTAACATCACATGTACCCACCACCGCCCTCACTGATCTCCCTTTAAGACTCACCTCTAAACGACGTCGTTCTATTGTCGTACCTGAAGCTGTCGATTCCTCCTCTCAACCCTCCACTGTCGCCGCCACCAAGTCTATTGTTCCCGATAATCAGTTTTCTTTCTCCAATATATCATTTGGTGTTGTGGGACTTGGAAGTGGAGTTACACTACTCGCATATGGGTTTGGTGCTTACTTTAATATCCTACCTGGATCGGAGTGGTCGGCGCTCATGTTGACTTATGGATTCCCTGTTGCGGTTATTGGTATGGCTCTCAAGGTGAAGACCAAACTTGAGTTGTCTGGTTTTCTTACTTTTTTGTTTAGTATTTTTCCATGTCTTATTACAAAGATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_45932.p1 GENE.R_Transcript_45932~~R_Transcript_45932.p1 ORF type:complete len:161 (+),score=15.94 R_Transcript_45932:119-601(+)
MPPTLRTAAPICASCNHFLSPHKHHYQQSLTSHVPTTALTDLPLRLTSKRRRSIVVPEAVDSSSQPSTVAATKSIVPDNQFSFSNISFGVVGLGSGVTLLAYGFGAYFNILPGSEWSALMLTYGFPVAVIGMALKVKTKLELSGFLTFLFSIFPCLITKI*

Click here to download the sequence:
Link to NCBI Protein BLAST