Transcript Information: R_Transcript_45933.p1


Annotated TAIR IDAT5G38660.1
Annotated Gene Nameacclimation of photosynthesis to environment
Annotated Gene Symbol(s)APE1
Annotation TypeOrtholog
Chromosome Positionchr5:15473285-15475497 | Reverse length=286
E-Value1.8E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7383772337827
Replicate 21.1426558049686
Replicate 30.77914073456301
Condition 2: 8 Hour
Replicate 10.99942305907123
Replicate 21.5211484245705
Replicate 31.1113230992074
Condition 3: 24 Hour
Replicate 11.2494044749771
Replicate 20.15003577476583
Replicate 31.042271651757


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_45933.p1 GENE.R_Transcript_45933~~R_Transcript_45933.p1 ORF type:3prime_partial len:147 (+),score=15.58,DUF2854|PF11016.4|3.2e-11 R_Transcript_45933:142-579(+)
ATGCCTCTAACTCTAAGAACAGCAGCTCCAATTTGTGCTTCTTGTAATCACTTTCTCTCTCCTCATAAGCACCACCACCAGCAATCCTTAACATCACCTGTACCCACCACCGCCCTCACTGGTCTCCCTTTAAGACTCACCTCTAAACGACGTCGTTCTATTGTCGTACCTGAAGCTGTCGATTCCTCCTCTCAACCCTCCACTGTCGCCGCCACCAAGTCTATTGTTCCCGATAATCAGTTTTCTTTCTCAAATATTTCATTTGGTGTTGTGGGACTTGGAAGTGGAGTTACACTACTCGCATATGGGTTTGGTGCTTACTTTAATATCCTACCTGGATCGGAGTGGTCGGCGCTCATGTTGACTTATGGATTCCCTGTTGCGGTTATTGGCATGGCTCTCAAGTACGCAGAGCTTAAACCTGTACCATGTGTTACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_45933.p1 GENE.R_Transcript_45933~~R_Transcript_45933.p1 ORF type:3prime_partial len:147 (+),score=15.58,DUF2854|PF11016.4|3.2e-11 R_Transcript_45933:142-579(+)
MPLTLRTAAPICASCNHFLSPHKHHHQQSLTSPVPTTALTGLPLRLTSKRRRSIVVPEAVDSSSQPSTVAATKSIVPDNQFSFSNISFGVVGLGSGVTLLAYGFGAYFNILPGSEWSALMLTYGFPVAVIGMALKYAELKPVPCVT

Click here to download the sequence:
Link to NCBI Protein BLAST