Transcript Information: R_Transcript_45938.p1


Annotated TAIR IDAT5G38660.1
Annotated Gene Nameacclimation of photosynthesis to environment
Annotated Gene Symbol(s)APE1
Annotation TypeOrtholog
Chromosome Positionchr5:15473285-15475497 | Reverse length=286
E-Value4.1E-103
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.683946242902
Replicate 211.143287930438
Replicate 311.901265901912
Condition 2: 8 Hour
Replicate 110.396233161959
Replicate 29.2441634427248
Replicate 312.675705740494
Condition 3: 24 Hour
Replicate 115.262452849703
Replicate 211.335663787336
Replicate 313.817377819103


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_45938.p1 GENE.R_Transcript_45938~~R_Transcript_45938.p1 ORF type:5prime_partial len:179 (+),score=26.66,DUF2854|PF11016.4|5.4e-50 R_Transcript_45938:1-537(+)
CTTGGAAGTGGAGTTACACTACTCGCATATGGGTTTGGTGCTTACTTTAATATCCTACCTGGATCGGAGTGGTCGGCGCTCATGTTGACTTATGGATTCCCTGTTGCGGTTATTGGCATGGCTCTCAAGTACGCAGAGCTTAAACCTGTACCATGTGTTACTTACACTGATGCTCAAGCACTGAGGGAAAAGTGTGCAACAGACATTCTGAAGCAGGTCAAGTCCGATGTGACTAGATTCCGCTATGGAGATGAGCAACATCTTGACGAGGCCTTGAAACGGATATTCCAATACGGTCTGGGTGGAGGTATCCCACGGAGAAGTGCTCCCGTTCTGCAAATGATTCGTGAAGAAGTAACTGAAGATGGCAGATATTGTTTAGTTCTAGTGTTTGCGGCAAAAGATCTGAAGCTTTCAGATTTTGAACAAAGACAGGCCAAGTTCACGTCATTCTTTGGACCAGGGATTACAGCTGAAGTGGGAACAGGAGAAAATGATCTTTATGAAGTTCGATTAATATCTAACACACCAGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_45938.p1 GENE.R_Transcript_45938~~R_Transcript_45938.p1 ORF type:5prime_partial len:179 (+),score=26.66,DUF2854|PF11016.4|5.4e-50 R_Transcript_45938:1-537(+)
LGSGVTLLAYGFGAYFNILPGSEWSALMLTYGFPVAVIGMALKYAELKPVPCVTYTDAQALREKCATDILKQVKSDVTRFRYGDEQHLDEALKRIFQYGLGGGIPRRSAPVLQMIREEVTEDGRYCLVLVFAAKDLKLSDFEQRQAKFTSFFGPGITAEVGTGENDLYEVRLISNTPA*

Click here to download the sequence:
Link to NCBI Protein BLAST