Transcript Information: R_Transcript_45942.p1


Annotated TAIR IDAT5G54130.2
Annotated Gene NameCalcium-binding endonuclease/exonuclease/phosphatase family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21962900-21965279 | Forward length=436
E-Value6.8E-254
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.9227505861223
Replicate 26.7169372696435
Replicate 310.044117603682
Condition 2: 8 Hour
Replicate 16.9568341125283
Replicate 27.1534812154128
Replicate 311.735605076715
Condition 3: 24 Hour
Replicate 112.429058946542
Replicate 214.111418440056
Replicate 312.975932308787


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_45942.p1 GENE.R_Transcript_45942~~R_Transcript_45942.p1 ORF type:complete len:447 (+),score=63.14,Exo_endo_phos|PF03372.19|1.6e-12 R_Transcript_45942:232-1572(+)
ATGGTTAGGCAAAACGGTATGTTGAAAGGAAGGGTTTCAAGAATTGGAAGCTATGCAATAGCTTCTTCTATTACTGATCAATGTATTACTTGCACAACCTTCAATATCCTTGCTCCAATCTACAAGAGATTAAACGACGAGGAACAGGATGAGAACTGTCGTGAAAGCGATAATAGGACATATTGGCTAACAAGAAATCAGAGGATATTGACCTGGTTGTTGAATGAAAGATCTTCCATTATTTGTCTTCAGGAGTTTTGGGTTGGAAATGAAGAGCTTGTCAATATGTATGAAAAGAGGCTAGGGGATGCCGGTTACATTAGTTTCAAGCTTGCAAGAACAAACAATCGTGGCGATGGTTTGCTGACGGCTGTACACAAAGATTCTTTCAAGGTTATCAATCATCAAGACTTGTTACTCAATAATATCGGAGATCGTGTTGCACAGCTACTACATGTTGAATTATTGAACCCGTTCTTTCAAACCCGAAACAATAATGTCAGACAGGAGATTCTCATAGTGAACACCCACTTGTTATTTCCTCATGATTCAAGTCTCTGTTTAGTGAGACTACACCAAGTCTACGAGATCCTACAGAATGTGGAAGCTTATCAGAAAGAACATAAACTGAATCCCATGCCTATATTGCTTTGTGGTGATTGGAATGGCAGTAAACGTGGACATGTGTACAAGTTCTTAAGATCCCAAGGGTTTGTATCAGCATACGACACTGCTCATCAGTACACTGATGCTGATGCTCATAAGTGGGTTAGCCATCGCAATCACCGGGGAAACATTTGTGGGGTTGATTTCATTTGGCTTCTCAACCCAAACAGATACAGGAAGCTTCTTAAAACAAGCTGGAATGAGACAGTGTTTGGCATGTTTAAGTCTCTACTTCGAAGAGCTTCATTGACAGAAAGCGATGCCTTTGCATTTCTGAAGGCAGATAGTGGAGGGGATTATATAACGTACTCAGGCTTTTGTGAAGCACTTAGACAGCTAAATTTAACTGGCCACCCGTATGGGATTAGCGAGGAAGAAATGAAGGACTTGTGGGTTCAAGCAGACATTGATGGAAATGGGGTTCTTGATTATAATGAATTCCAGCAACGTATCTGGAATCCAACTTGCTCGGAAGAATTGGAAAGTAGAAGTGAGAATTATAATGGCATCAAAGATACAGTGCAGACTATTGGGTTCAGTGTGAAGAACGCGGTCCTCTTCCCAACGGAAGTGGAGAAGGGGATGTGGCCTGAAAACTACTCGTTGTCAGATCATGCTCGTCTTACTGTTGTATTCTCACCAGTGAGAATGCCTTGCTCTCAGCTGATTTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_45942.p1 GENE.R_Transcript_45942~~R_Transcript_45942.p1 ORF type:complete len:447 (+),score=63.14,Exo_endo_phos|PF03372.19|1.6e-12 R_Transcript_45942:232-1572(+)
MVRQNGMLKGRVSRIGSYAIASSITDQCITCTTFNILAPIYKRLNDEEQDENCRESDNRTYWLTRNQRILTWLLNERSSIICLQEFWVGNEELVNMYEKRLGDAGYISFKLARTNNRGDGLLTAVHKDSFKVINHQDLLLNNIGDRVAQLLHVELLNPFFQTRNNNVRQEILIVNTHLLFPHDSSLCLVRLHQVYEILQNVEAYQKEHKLNPMPILLCGDWNGSKRGHVYKFLRSQGFVSAYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNRYRKLLKTSWNETVFGMFKSLLRRASLTESDAFAFLKADSGGDYITYSGFCEALRQLNLTGHPYGISEEEMKDLWVQADIDGNGVLDYNEFQQRIWNPTCSEELESRSENYNGIKDTVQTIGFSVKNAVLFPTEVEKGMWPENYSLSDHARLTVVFSPVRMPCSQLIF*

Click here to download the sequence:
Link to NCBI Protein BLAST