Transcript Information: R_Transcript_459494.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value6E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.23705144097037
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.35360280429325
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_459494.p1 GENE.R_Transcript_459494~~R_Transcript_459494.p1 ORF type:internal len:154 (+),score=13.53,RVT_1|PF00078.23|1.4e-21 R_Transcript_459494:1-459(+)
AATATTCTGATAGTCCAGGAAGTGTTGCATACAATGCGAAACACACGAACTGGGACTGGCCTCATGGCAATTAAGATTGATCTTGCCAAGGCGTATGATAGGCTCCGATGGGATTTTATCAAAGACACTCTTATGGAGATGCGCATCCCACTGCCTTTGATAGAAGTGATAATGCACTGTGTTTCAACCCCGCAAATGCAAATCCTTTGGAATGGAGAACCCACTGAAAAATTTTCCCCGACTAGAGGTATTCGTCAAGGTGACCCTCTCTCACCCTATCTCTTCGTGATGTGCATGGAAAGACTACATCATCTCATTGAAGATTCTATCACCTGTGGCTACTGGAAACCCATTCAATGCAGTCGTGGGGGCCCCAGTTTGTCTAACCTCTTCTTGGCAGACGATGTAGTTCTATTCTCAGAGGCAACGCTTGATCAAGCCGTCATCATCAAACAATGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_459494.p1 GENE.R_Transcript_459494~~R_Transcript_459494.p1 ORF type:internal len:154 (+),score=13.53,RVT_1|PF00078.23|1.4e-21 R_Transcript_459494:1-459(+)
NILIVQEVLHTMRNTRTGTGLMAIKIDLAKAYDRLRWDFIKDTLMEMRIPLPLIEVIMHCVSTPQMQILWNGEPTEKFSPTRGIRQGDPLSPYLFVMCMERLHHLIEDSITCGYWKPIQCSRGGPSLSNLFLADDVVLFSEATLDQAVIIKQC

Click here to download the sequence:
Link to NCBI Protein BLAST