Transcript Information: R_Transcript_46027.p1


Annotated TAIR IDAT5G41620.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: intracellular protein transport protein USO1-related (TAIR:AT1G64180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16646330-16648776 | Forward length=623
E-Value3.1E-130
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.6520893006628
Replicate 25.2399144145386
Replicate 36.9159958187336
Condition 2: 8 Hour
Replicate 17.6491619992267
Replicate 27.9219179995823
Replicate 39.2500354295864
Condition 3: 24 Hour
Replicate 19.0148457700409
Replicate 27.621188936011
Replicate 38.7092437497602


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_46027.p1 GENE.R_Transcript_46027~~R_Transcript_46027.p1 ORF type:complete len:573 (+),score=118.79 R_Transcript_46027:187-1905(+)
ATGCATTTAGGTAATCATAATCACAGGATTCGTCGCCACTCTCATAGATCTTTGTTGAATAATAATAATAATGGTGGTAAAGATGAAGGAATTGAACATCACCATCATCTTCATCGTCATCATCAACATCCTGATGGTTCTGCCTCCCCTGACCATCATCCTGCAAGCGCTGGCAGCCTGAGGAGACATATCGCAGCTTCTTTGATGAGGCATCATCAATCAGCAGAAAGGAACAAACATGCTTTGCAGCCTTTATCTCCTGCAAGTTATGGTAGCTCGTTAGAGATGGCTCCGTATAATCCAGCTGCCACTCCTGACAGTTCTATTGAATTAAGGGGGAGGATAGGTGAGTCTAGCTACAGCTTTAAAACATCTACTGAATTGCTGAAGGTTCTAAACCGTATATGGAGCCTCGAGGAACAACATGCATCTAATGTGTCTCTGGTGAAAGCACTGAAAAATGAGCTTGATCTTGCCCGTGCTAGGATCAAAGAATTACTCAGAGACCAGCAAGCAAATCGCCATGAGATTGATGAGTTGATGAAACAAATCTCAGAAGATAACTTAGGCAGGAAGAGCAAAGAAAAAGAGCGAATTGATTCCGCTCTTCAGTCTATGAGGAACGAATTGGAAGATGAAAGGCGGTTGAGAAAACGGTCTGAAAGCTTGCATCGGAAGCTAGCTCGGGAGCTGTTTGAGATCAAAGTTGCCCTATCTACTACAGTCAAGGACCTCGAGAAACAAAGAAAATCAAGTGAGCTCTTAGAAGAACTTTGTGACGAGTTTGCCAAAGGTATAAGAGAATACGCAAGGCAGGTGCATGCTGTCAGACAGAAGTCTGACAAGGACTGGAGTGGCATGGCCGACCATGACAATTTGGTTCTACATATTTCAGAATCATGGCTTGATGAGCGAATGCAGATAAAAGATCGAGAAACACAGGATAAGACTGCCGAGAGATCCTCTGTTGTCGACAAATTGAGACATGAAATACAGGCTTTTCTTACAGCCCAACAAATGGCTCATGTGAGGAGCAAGGATACCTTGCCACATAGGGATCCCAAAGAGAGCCGTTTCAGGCGCCAGTCTCTTGAGTCCATTCCTGAGGCAGCGAGCGCACCTCAATGTGTAGGCCATGAAGATTCTGCCTTTTCTGATTCACGTTGTGTTGAGATAAGTAAAGCAGGGCCTCGTAATTACGAGGAGCAGGAAGAACTTGCTTTAAGCGGAAGGAGAAAGGGTCAGACTCCCCCTAGCATGCAGATGTCTGATCCTCAGAACACTCCACGCGAAATTGATGCGAGGATCATGAAAAACGGTGAAGGAACTCCAACAGAAATAAGCATGTTGCAAAAATCTGAAATCTATGATTCGATTCAAGAGGGGAACCAAAGAAAGAAGACTTACAATGAAGAAGGGCACGGTTCAAACTCAAAAACAGTTGATAAGCTGATGAGCGAGCTGCTTCTTTCAGAGGGTGGGAGCCACCCTTCTGAGTATGAGTACAAGAAAAAGGTTCCTTCTGCAAATCCTGCACTGAGGAGGCATGTAAGCCCTGTCAGGCAGTGGATAACAAGTATGAAATCTCCTGATCCCCGAATTTCGGAATCATCCAAGAAAAGTCAGCCAGTGAGAGATAACACACTAAAAGCCAAGTTACAGGAACCCAAGTCAAAGGGGCAGCGATCGCGATTGAAAATCTTAAAGGGTTCATCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_46027.p1 GENE.R_Transcript_46027~~R_Transcript_46027.p1 ORF type:complete len:573 (+),score=118.79 R_Transcript_46027:187-1905(+)
MHLGNHNHRIRRHSHRSLLNNNNNGGKDEGIEHHHHLHRHHQHPDGSASPDHHPASAGSLRRHIAASLMRHHQSAERNKHALQPLSPASYGSSLEMAPYNPAATPDSSIELRGRIGESSYSFKTSTELLKVLNRIWSLEEQHASNVSLVKALKNELDLARARIKELLRDQQANRHEIDELMKQISEDNLGRKSKEKERIDSALQSMRNELEDERRLRKRSESLHRKLARELFEIKVALSTTVKDLEKQRKSSELLEELCDEFAKGIREYARQVHAVRQKSDKDWSGMADHDNLVLHISESWLDERMQIKDRETQDKTAERSSVVDKLRHEIQAFLTAQQMAHVRSKDTLPHRDPKESRFRRQSLESIPEAASAPQCVGHEDSAFSDSRCVEISKAGPRNYEEQEELALSGRRKGQTPPSMQMSDPQNTPREIDARIMKNGEGTPTEISMLQKSEIYDSIQEGNQRKKTYNEEGHGSNSKTVDKLMSELLLSEGGSHPSEYEYKKKVPSANPALRRHVSPVRQWITSMKSPDPRISESSKKSQPVRDNTLKAKLQEPKSKGQRSRLKILKGSS*

Click here to download the sequence:
Link to NCBI Protein BLAST