Transcript Information: R_Transcript_460296.p1


Annotated TAIR IDAT1G22960.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:8128086-8130242 | Reverse length=718
E-Value4E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.18257652535911
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.19444245079292
Replicate 30.15784009235119
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.19032786684258


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_460296.p1 GENE.R_Transcript_460296~~R_Transcript_460296.p1 ORF type:complete len:115 (+),score=7.62,PPR_2|PF13041.2|1,PPR_2|PF13041.2|9.3e-06 R_Transcript_460296:24-347(+)
ATGAAGAAACTTGGTCTCCTCCCCGGCCTTTCCACCATTACTGCTGTTATTGCTTGTTGTGTTAATAGTGGAAATATTTCCAAAGCTGAGGAATACTTGGCACTCATTGAAAAATCGAAATTAGAACCAAATGTTATCACTTATTATAATTTAATCGCTACCTGCTATAATGCTAAAGATTACATTCGAGGTGATAAATATTATAGAACGATGGTTTTAGAGAAAAATATGGCTCCAGGTCCATATATTACCGCACTTCACAAGAAAGTTCACGATGAAATTCAAATTAGAGCTGGAGCGAAACTCATCTTCGGAGAAGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_460296.p1 GENE.R_Transcript_460296~~R_Transcript_460296.p1 ORF type:complete len:115 (+),score=7.62,PPR_2|PF13041.2|1,PPR_2|PF13041.2|9.3e-06 R_Transcript_460296:24-347(+)
MKKLGLLPGLSTITAVIACCVNSGNISKAEEYLALIEKSKLEPNVITYYNLIATCYNAKDYIRGDKYYRTMVLEKNMAPGPYITALHKKVHDEIQIRAGAKLIFGEE*

Click here to download the sequence:
Link to NCBI Protein BLAST