Transcript Information: R_Transcript_460754.p1


Annotated TAIR IDAT5G07960.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0139 (InterPro:IPR005351); Has 193 Blast hits to 193 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:2542350-2543253 | Forward length=107
E-Value5E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.42448746406323
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.28471935985169
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_460754.p1 GENE.R_Transcript_460754~~R_Transcript_460754.p1 ORF type:internal len:86 (+),score=11.33,UPF0139|PF03669.9|1.9e-21 R_Transcript_460754:1-255(+)
CTGAACATGAGAAAGAAAGAGAATGAAAGAGACTTCAACTTGAAGAAATCAGAAGAACAACCATTCGACTTGTTTTCATTCATTGGATTATTTTTTGGATTGATGGGAGTGATGCTCAAAATTAAAGTCTGCTCTTTGATCTCCCTCATTGCTGGTATTGTGTCCTACACCAATGCTAAAACCAACGAAAAGGATTTCAAGCAATTGTTCTCTTCGCTTTCCATCTCTATAATGGGCGTGGTGATGAGTTACAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_460754.p1 GENE.R_Transcript_460754~~R_Transcript_460754.p1 ORF type:internal len:86 (+),score=11.33,UPF0139|PF03669.9|1.9e-21 R_Transcript_460754:1-255(+)
LNMRKKENERDFNLKKSEEQPFDLFSFIGLFFGLMGVMLKIKVCSLISLIAGIVSYTNAKTNEKDFKQLFSSLSISIMGVVMSYK

Click here to download the sequence:
Link to NCBI Protein BLAST