Transcript Information: R_Transcript_46090.p1


Annotated TAIR IDAT5G60580.2
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24354298-24356706 | Forward length=494
E-Value3E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7771507487751
Replicate 24.2400295986311
Replicate 35.3819713575426
Condition 2: 8 Hour
Replicate 13.8511748751978
Replicate 23.2998582911264
Replicate 35.568843646643
Condition 3: 24 Hour
Replicate 14.9036093107717
Replicate 24.8393092323014
Replicate 35.5675520659875


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_46090.p1 GENE.R_Transcript_46090~~R_Transcript_46090.p1 ORF type:complete len:515 (+),score=88.17,RINGv|PF12906.3|7.7e+03,RINGv|PF12906.3|1.3e-10 R_Transcript_46090:152-1696(+)
ATGATGGAAGTTTCTAGAACTGAGGTCACTGAAGGAGAAGTTGTTGATGTCCATAACTCTCAGTCTCACCAGTGTTCTTCTGATCTTGAGGTTGAAATAGCTGACAAGAGGTCTTCAGATCGTCATCCAAGACGTCCAAACCTGTCTCTTCTGCAGATTCCTGCTAGAACCTTAGAGAATGTGCTTTCTAATACGACAAGGACGGACATTCCTACTCTATCAAGTCCTTGTTCCACCAGATCAGGTCTGCCACCAAGACCTTGCTCAGCTGGGATCAGATCATCAATGAGGAGCATGCTACCTCAGAGAAGCTTCTGTGCAAAGCCTTCATCCCAAGATGCTGAAAAGACAGTTCTAATCTTCTCAAACGCACCGAGATCAGATGTACCTGTGGACAAGCCGTCTACTTCAAGGTCATTCTCTCTAAACAAGGTTTTTTCTTCTCCCTCAAACAAGAGAGCATGTTCACTACCAGTTACACCAAACTCAGGTGACAAATCTGGGCAGGAGAGGAATGTGAATCCTGAAGACCATCAAAATTGCCATAACCAAGAAGTGCAGCTGCCCATGAAACGTTCATTTTCAGTTCCAGTGAATGTTAAAAGTTCAAGCTTGAGAAGAATTGGTTCCACGGGAGGAGTAATTCGCGTTGTTCCAATGACACCCCATCAGGACGCAGTTGATAATACATTGCCTAATGACACCACAGTTAGAGAAGATGGTGGTGAAGATGCTGGTGAAGACATCCCTGAAGAAGAAGCTGTTTGCAGAATTTGTTTTGTAGAGTTAGGGGAAGGGGGCGAAACTTTTAAGTTGGAGTGCAGCTGCAAAGGTGAGCTTGCTCTTGCTCACAAGGAATGTGCTGTCAAGTGGTTTAGTATCAAAGGAAACAAGATATGTGATGTCTGTAGGCAGGATGTAAGGAATCTACCAGTAACATTGTTGAGATTACAGAGTACTCATATCGTTCAGAGGCGACCCTCAACTATCACAGAGCATACAGAAGGCACACGGTACAGGTTTTGGCAGGACATTCCAATTCTTGTTATTGTGAGCATGCTAGCATATTTTTGCTTTTTGGAGCAGCTTCTGGTGTCAGATCTTGGACCTCGTGCTCTAGCCATATCTTTACCATTTGCGTGTGTATTGGGTCTTCTATCATCCATGATAGCTTCTACCATGGTGAGCAGAAGTTACATATGGGCTTATGCTTCCTTCCAGTTTGCAATTGTGGTCCTTTTTGCTCATATCTTCTATGCAGTGCTCAATGTTAATCCAATTCTTTCAGTTCTCCTTTCCTCTTTCACTGGATTCGGAATTGCAATAAGCACGAATGCACTTGTTGTGGAGTATCTTAAATGGAGAGCAAGTTCTGCCCAACAATACTCCGATAACGGATGGCAATTACGGCGACATTATCGAGATCGCCGTCACCACTCCCAGCATCAACAGCAGATGCATCAATACCACTCACATGTTGTAGAACGAACAATGGGTCCCATGGATAACATTGGACCACAAGAAACAAGGGTGGATCATTCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_46090.p1 GENE.R_Transcript_46090~~R_Transcript_46090.p1 ORF type:complete len:515 (+),score=88.17,RINGv|PF12906.3|7.7e+03,RINGv|PF12906.3|1.3e-10 R_Transcript_46090:152-1696(+)
MMEVSRTEVTEGEVVDVHNSQSHQCSSDLEVEIADKRSSDRHPRRPNLSLLQIPARTLENVLSNTTRTDIPTLSSPCSTRSGLPPRPCSAGIRSSMRSMLPQRSFCAKPSSQDAEKTVLIFSNAPRSDVPVDKPSTSRSFSLNKVFSSPSNKRACSLPVTPNSGDKSGQERNVNPEDHQNCHNQEVQLPMKRSFSVPVNVKSSSLRRIGSTGGVIRVVPMTPHQDAVDNTLPNDTTVREDGGEDAGEDIPEEEAVCRICFVELGEGGETFKLECSCKGELALAHKECAVKWFSIKGNKICDVCRQDVRNLPVTLLRLQSTHIVQRRPSTITEHTEGTRYRFWQDIPILVIVSMLAYFCFLEQLLVSDLGPRALAISLPFACVLGLLSSMIASTMVSRSYIWAYASFQFAIVVLFAHIFYAVLNVNPILSVLLSSFTGFGIAISTNALVVEYLKWRASSAQQYSDNGWQLRRHYRDRRHHSQHQQQMHQYHSHVVERTMGPMDNIGPQETRVDHS*

Click here to download the sequence:
Link to NCBI Protein BLAST