Transcript Information: R_Transcript_46104.p1


Annotated TAIR IDAT1G31480.1
Annotated Gene Nameshoot gravitropism 2 (SGR2)
Annotated Gene Symbol(s)SGR2
Annotation TypeOrtholog
Chromosome Positionchr1:11266225-11271527 | Forward length=933
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.941189409629
Replicate 29.2662800383455
Replicate 310.561361882338
Condition 2: 8 Hour
Replicate 110.399500273544
Replicate 214.442854107183
Replicate 314.23101351858
Condition 3: 24 Hour
Replicate 112.349059339513
Replicate 29.5962133698358
Replicate 38.9323654641232


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_46104.p1 GENE.R_Transcript_46104~~R_Transcript_46104.p1 ORF type:complete len:963 (+),score=227.36,DDHD|PF02862.13|1.4e+03,DDHD|PF02862.13|3.3e-42 R_Transcript_46104:445-3333(+)
ATGGGCACTGATGGAAATGCTAGAAGTAGCCAATATGAAGCTCATTTATCACTTTCAGAGCATGGTGTTGATGATGGGTGTTCTAGAGATGGTGAAGATCCTGATTTGTTGAAGAACACACCTTCAAATATCAGAAGATTGGCTGATGAGATTGAGCAATGTGAGGGTAGACAAAAGTATCTTGCTCAAACTAGGAGCCCTTCTGATGGTGGTGATGTTAGGTGGTACTTTTGTAAAGTCCCTTTGAGAGTTAATGAGTTGGCAGCATCTATTCCCCATGGTGAGATTGTAGGTAAAGGAGAATATTTTCGGTTTGGTATGAGGGATTCTCTTGCAATAGAGGCATCTTTCCTACAGAGAGAGGAAGAATTGCTATCTTATTGGTGGAAGGAGTATGCAGAATGCAGTGAAGGTCCTAAAGGACGGACTAGTTCAACCACTGAGGCAGACTTATCTCAATCTGAGCTTTATACAGTTGAGGAGGAAAGAGTTGGCGTTCCTGTCAAGGGTGGCCTCTATGAGGTAGACTTGGTGAAAAGACACTCCTTTCCAGTGTACTGGAATGGGGAAAATCGGCGTGTTTTAAGAGGCCATTGGTTTGCACAAAGCAGCGGCCTTGATTGGCTTCCCCTTCGTGAAGATGTGGCTGAACAATTGGAGTTTGCATATCGTAGGCAGGTTTGGCATCGAAGGACATTTCAACCATCTGGGCTCTTTGCAGCTCGAGTTGATTTACAAGGCTCTACACCAGGACTGCATGCCCTCTTCACTGGAGAGGATGACACATGGGAAGCATGGCTAAAAGTTGATGCATCTGGCTTCTCCAGTGTCATCAACATAGGAGGAAGTGGCGTGAAACTGAGAAGAGGATATGCTGCGTCACCATCCCCCAAACCAACCCAGGATGAATTACGTCAGCAAAAAGAGGAGGAAATGGATGATTATTGTTCGCAGGTCCCGGTCCGGCATTTGGTGTTTATGGTCCATGGAATTGGTCAGAGATTGGAGAAATCTAATCTGGTTGATGATGTGACAAATTTTCGCCATATTACCTTGAGTCTGGCTGAAAGGCACCTGACTTCATATCAACTTGACACCCAGAGAGTTCTTTTCATTCCATGTCAGTGGAGAAAGGGCTTGAAGCTCAGTGGAGAATCTGCAGTGGAGAAAATCACTTTAGATGGTGTCCGAGGCTTACGTACTATGTTGAGTGCAACTGTTCATGATGTTTTGTACTACATGAGCCCCATCTACTGTCAGGATATCATTGACTCGGTTTCAAACCAGCTGAATTGTTTGTATCTGAAGTTTCTGAAGCGAAATCCGGGGTATGATGGAAAGGTTTCATTATATGGTCATTCTCTGGGTAGTGTTCTCTCATATGATATTCTCTGCCACCAAGAGAATCTTTCCTCTCCATTTCCAATGGATTGGATGTACAGAGAACATGAAAGAGAAGATGAATCATCAAGGGAAATCTCCAAGTTATCTTCTGAATACAACTCCAAGGCTGATGGAACTGAACCCTCAAAGGAAGCTTCTAATGAGGAGAAACTAGGAAGACAACATGTTCCATCAAATCTTGTGAATGAACACATTAAAGATCCTCTGCCAGTAGTGGATGATTGTTCTTCTTACTCATCTTTTAGAAAAGAAAATTTCATTAAGGAGGGGGATAGTGAAATGCAGGTTGGCACAACTTTGACAAGAACAGATGATCAGCTTGACGATCCTAGCCATGTATGTACTGTAGGATTGGACATTTTGGGTGAAGTTGGTGGTAATAATCTTGAAACCAAGCACTGCTTGAAGGAGACATATAATTTGGGTGGTGTCACAAAGCCTGGCGTTTCAACACATGAGACCCAAGATCAATATTCCACAAATATGAAAGATAAAGACAAATGTATCACAGATCTCGAGTCAGAGGTTGACTTTCTAAAAGCACGAGTGGCAAAACTGGAAGCACAGGTTGGCAGTACTAGTAGGTCCGATGGAGTTAATCACGATGAGCATCCAATCAGTTCAGATCAAGATGAACTCAGAAATAATCCAGCAGGAGAGGATGATTCTCCCAAGAGTTATAAACCTGTTATCAATTACACAAAGCTGGAATTCAAGGTTGATACATTCTTTGCTGTTGGGTCCCCTCTTGGTGTCTTCCTTGCATTGCGCAATGTTCGCATTGGGATTGGTGAAGGGCGGGACTACTGGGAAGAAGAGAACATTGTTGAAGAGATGCCTGCTTGTCAGCGGATGTTCAACATCTTTCATCCTTTTGATCCTGTGGCATATAGAGTAGAACCACTTGTATGTAAAGAATACATTGGGAAACGCCCTGTTATTACTCCTTACCACAAAGGAGGCAAGCGATTGCACATTGGACTTCAGGAGTTTAAGGAAGATTTAGCTGCACGGTCTCAGTCGGTTATGGACCATCTAAGCTCTGTTAGGGTCAAAGTGCTCACAATTTGTCAATCACGAAAGAGTGAGAGCCTTGAAGAAACAATTGAAAATTTCAATGAAGAAGCTAGATCATATGGTTCATTTATGATGGAGAGATTAACTGGAAGTGAAGATGGACGAATTGATCATGTTCTTCAAGATAAAACATTTCGGCATCCGTATATATCAGCTATTGGATCACACACAAACTACTGGAGGGACTATGATACCGCTCTGTTCATACTAAAGCACCTGTACGAAGAAATTCCCGAAGGACCTCCTCAGCGAAACTTCAGTACCAGAAGATCAAAAGATAGGATCTTGAGTGGTTGGTCAGACCGTAAGGAACTTGCTGAAGAAGAAGTTCCATTGACATTTTCTGATCCTAGTCTGATGGGAAGATACTCCAACAAATCAATCAAAGTTGTCAAGACATCCAGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_46104.p1 GENE.R_Transcript_46104~~R_Transcript_46104.p1 ORF type:complete len:963 (+),score=227.36,DDHD|PF02862.13|1.4e+03,DDHD|PF02862.13|3.3e-42 R_Transcript_46104:445-3333(+)
MGTDGNARSSQYEAHLSLSEHGVDDGCSRDGEDPDLLKNTPSNIRRLADEIEQCEGRQKYLAQTRSPSDGGDVRWYFCKVPLRVNELAASIPHGEIVGKGEYFRFGMRDSLAIEASFLQREEELLSYWWKEYAECSEGPKGRTSSTTEADLSQSELYTVEEERVGVPVKGGLYEVDLVKRHSFPVYWNGENRRVLRGHWFAQSSGLDWLPLREDVAEQLEFAYRRQVWHRRTFQPSGLFAARVDLQGSTPGLHALFTGEDDTWEAWLKVDASGFSSVINIGGSGVKLRRGYAASPSPKPTQDELRQQKEEEMDDYCSQVPVRHLVFMVHGIGQRLEKSNLVDDVTNFRHITLSLAERHLTSYQLDTQRVLFIPCQWRKGLKLSGESAVEKITLDGVRGLRTMLSATVHDVLYYMSPIYCQDIIDSVSNQLNCLYLKFLKRNPGYDGKVSLYGHSLGSVLSYDILCHQENLSSPFPMDWMYREHEREDESSREISKLSSEYNSKADGTEPSKEASNEEKLGRQHVPSNLVNEHIKDPLPVVDDCSSYSSFRKENFIKEGDSEMQVGTTLTRTDDQLDDPSHVCTVGLDILGEVGGNNLETKHCLKETYNLGGVTKPGVSTHETQDQYSTNMKDKDKCITDLESEVDFLKARVAKLEAQVGSTSRSDGVNHDEHPISSDQDELRNNPAGEDDSPKSYKPVINYTKLEFKVDTFFAVGSPLGVFLALRNVRIGIGEGRDYWEEENIVEEMPACQRMFNIFHPFDPVAYRVEPLVCKEYIGKRPVITPYHKGGKRLHIGLQEFKEDLAARSQSVMDHLSSVRVKVLTICQSRKSESLEETIENFNEEARSYGSFMMERLTGSEDGRIDHVLQDKTFRHPYISAIGSHTNYWRDYDTALFILKHLYEEIPEGPPQRNFSTRRSKDRILSGWSDRKELAEEEVPLTFSDPSLMGRYSNKSIKVVKTSR*

Click here to download the sequence:
Link to NCBI Protein BLAST