Transcript Information: R_Transcript_46108.p1


Annotated TAIR IDAT3G54010.1
Annotated Gene NameFKBP-type peptidyl-prolyl cis-trans isomerase family protein
Annotated Gene Symbol(s)PAS1, DEI1
Annotation TypeOrtholog
Chromosome Positionchr3:20001042-20005063 | Forward length=635
E-Value7.8e-317
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.576891050083
Replicate 216.942069723669
Replicate 319.058981045464
Condition 2: 8 Hour
Replicate 115.875450899862
Replicate 216.498609835726
Replicate 318.778510830196
Condition 3: 24 Hour
Replicate 121.948672844069
Replicate 219.112249462478
Replicate 322.300031933746


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_46108.p1 GENE.R_Transcript_46108~~R_Transcript_46108.p1 ORF type:complete len:637 (+),score=156.79,FKBP_C|PF00254.24|9.6e-13,FKBP_C|PF00254.24|1.7e-05,FKBP_C|PF00254.24|1.6e-15,TPR_11|PF13414.2|2.9e-09,TPR_11|PF13414.2|0.0097,TPR_2|PF07719.13|0.32,TPR_2|PF07719.13|2.4,TPR_2|PF07719.13|4.5e-05,TPR_1|PF00515.24|2.4e+02,TPR_1|PF00515.24|0.012,TPR_1|PF00515.24|9.4e-05,TPR_16|PF13432.2|14,TPR_16|PF13432.2|1.9e-06,TPR_12|PF13424.2|2.5e+02,TPR_12|PF13424.2|1.1e-06,TPR_6|PF13174.2|33,TPR_6|PF13174.2|4.7,TPR_6|PF13174.2|0.025,TPR_6|PF13174.2|1.4e+03,TPR_6|PF13174.2|3.4e+03,TPR_8|PF13181.2|9e+02,TPR_8|PF13181.2|1.2,TPR_8|PF13181.2|0.00048,TPR_8|PF13181.2|1.6e+04,TPR_19|PF14559.2|1.3e+02,TPR_19|PF14559.2|0.00013 R_Transcript_46108:332-2242(+)
ATGACGAATTCTGAAATTAGCGAGCAGGAGTATGCGCCTCCAAAAAAGAAGCAACTATCTGACGATGAAAAAAGGTTAAAGAAGCTAGTGCCTGGGGGTTTATTGAAAGCTGAATTGAGGCCTGGTGGTGGTGAATCTAGGCCATCTGATGGTGATCAGGTGATGTATCACTGTACGGTCCGGACATTGGAGGGAGTTGTAGTTCATTCAACCAAAAAGGAATTCGGAGGTAATGGAATTCCCGTGAGGCATATTTTAGGTAAAAGCAAGTTGATATTGGGATTGCTAGAAGGGATACCTACAATGCAGAAGGGTGAAATTGCCATGTTCAAGATGAAGCCTGGAATGCATTATGGTGAGAATGATTGCCCAGTAGTAGCCCCAGACAACTTCCCTAAGGATGAAGATCTCCACTTTGAGATTGAGCTAATTGATTTTGGCAAAGCAAAGGTTATTTCTGAAGATTTTGGAGTTGTGAGAAAGGTAATTAATGAAGGACAAGGTTGGGAGTCACCTAGGCCCCCTTATGAAGTAAAAGCTTGGATTTCTGCTAGAAGTGCTGATGGGAGGTTGATATGGAGTCATACTGAGGGTGAACCATTTTTCTTTATTTTTGGTACCTCAGAGTTGCCCAAAGGCCTTGAAATGGGAATCGGAACAATGACAAGGGGAGAGAAGGCCATGATCTATGTAACAAATCAATACTTGACTGAATCTTCATTCCTTCCTGGAGTAAAGGGTCTTGAGGAAGTTCATTTTGAAGTGGAGCTTGTTCATTTTGTCCAGGTTCGTGATGTGCTTGGAGATGGGCGCCTGATTAAACGTCGGATTCGTGATGGACAAGGTGAATTCCCTATGGATTGTCCACTTCAAGACAGTCAGCTACATGTGCACTACAAGGGCAGGCTAGTGGATGACAAGAAGACAGTGTTCTATGATACGAGAGTTGATAATGATGGTCAGCCGCTAGAGTTCAGTTCTGGAGAAGGCCTTGTACCTGAAGGCTTTGAAATGTGTGTTCGTTTGATGTTACCTGGAGAGATAGCTCTTGTCACTTGTCCTCCTGATTATGCATATGACAAGTTTCCAAGGCCAGCTAATGTTCCTGAAGGAGCCTATGTTGAGTGGGAAATTGAGCTTCTTGGATTTGAGATGCCAAAGGACTGGACGGGAATGGACTTCCGAAGTATTATGGATGAAGCAGAGAAGATCAGATGCACGGGTAACAGGCTTTTCAAGGAAGGAAAATATAACTTGGCGAAGGCCAAATATGAGAAGCTGCTTAGGGAATTTAATCATGTTAATCCACAGAATGATGAAGAAGGGAAAGAGTTCCTGAATACAAGAAATATGCTACACCTGAATGTTGCTGCCTGCTATCTGAAAATGGGAGAGTGCAGAAAGTCCATTGAGGCATGTGAAAAGGTATTAGATGCAAATCCTGTACATGCTAAAGCTTTGTATCGCCGTGGAATGGCTTACATGGAAGCTGGAGATTTTGAGGAAGCGAAAAGTAACTTCGATACGATGACGAAAGTTGATAAATCATCAGAACCTGATGCTAAAGCGGCCTTACAGAAGTTGAAGCAAAGGGAACAGGAAGCTGAAAGGAAAGCTAAGAAGCAATTTAAAGGATTGTTTGACAAACGGCCAGGTGAGATCGCAGGAGTTAGCCTTGAAAAAGAGCAAGAGATTAGTGAAGAAAAGCATGAAAAATTAGCAGAAGGAAAAGCGGAAGAACTACCTGAAGCTCCTACTAAACGTCATGGAAAGGTGTTCATCACAGGTTTGATTTGTCTCGTGATATTCCTGGTTTGTTTTGTATTGTTTCTTACATACGGTGGTGAGCTGCTTGGAAGTTCCAATCTCCCCGACGCTATGCCAGTACATGAAAAAAATGACGAATTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_46108.p1 GENE.R_Transcript_46108~~R_Transcript_46108.p1 ORF type:complete len:637 (+),score=156.79,FKBP_C|PF00254.24|9.6e-13,FKBP_C|PF00254.24|1.7e-05,FKBP_C|PF00254.24|1.6e-15,TPR_11|PF13414.2|2.9e-09,TPR_11|PF13414.2|0.0097,TPR_2|PF07719.13|0.32,TPR_2|PF07719.13|2.4,TPR_2|PF07719.13|4.5e-05,TPR_1|PF00515.24|2.4e+02,TPR_1|PF00515.24|0.012,TPR_1|PF00515.24|9.4e-05,TPR_16|PF13432.2|14,TPR_16|PF13432.2|1.9e-06,TPR_12|PF13424.2|2.5e+02,TPR_12|PF13424.2|1.1e-06,TPR_6|PF13174.2|33,TPR_6|PF13174.2|4.7,TPR_6|PF13174.2|0.025,TPR_6|PF13174.2|1.4e+03,TPR_6|PF13174.2|3.4e+03,TPR_8|PF13181.2|9e+02,TPR_8|PF13181.2|1.2,TPR_8|PF13181.2|0.00048,TPR_8|PF13181.2|1.6e+04,TPR_19|PF14559.2|1.3e+02,TPR_19|PF14559.2|0.00013 R_Transcript_46108:332-2242(+)
MTNSEISEQEYAPPKKKQLSDDEKRLKKLVPGGLLKAELRPGGGESRPSDGDQVMYHCTVRTLEGVVVHSTKKEFGGNGIPVRHILGKSKLILGLLEGIPTMQKGEIAMFKMKPGMHYGENDCPVVAPDNFPKDEDLHFEIELIDFGKAKVISEDFGVVRKVINEGQGWESPRPPYEVKAWISARSADGRLIWSHTEGEPFFFIFGTSELPKGLEMGIGTMTRGEKAMIYVTNQYLTESSFLPGVKGLEEVHFEVELVHFVQVRDVLGDGRLIKRRIRDGQGEFPMDCPLQDSQLHVHYKGRLVDDKKTVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFPRPANVPEGAYVEWEIELLGFEMPKDWTGMDFRSIMDEAEKIRCTGNRLFKEGKYNLAKAKYEKLLREFNHVNPQNDEEGKEFLNTRNMLHLNVAACYLKMGECRKSIEACEKVLDANPVHAKALYRRGMAYMEAGDFEEAKSNFDTMTKVDKSSEPDAKAALQKLKQREQEAERKAKKQFKGLFDKRPGEIAGVSLEKEQEISEEKHEKLAEGKAEELPEAPTKRHGKVFITGLICLVIFLVCFVLFLTYGGELLGSSNLPDAMPVHEKNDEF*

Click here to download the sequence:
Link to NCBI Protein BLAST