Transcript Information: R_Transcript_4611.p1


Annotated TAIR IDAT5G43822.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17620830-17621868 | Forward length=195
E-Value4E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.8848887811658
Replicate 23.131027255062
Replicate 35.2243436622804
Condition 2: 8 Hour
Replicate 11.5035180230765
Replicate 21.1768885179571
Replicate 36.2097615280271
Condition 3: 24 Hour
Replicate 13.6249169306901
Replicate 22.3216061990081
Replicate 35.5679248764914


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4611.p1 GENE.R_Transcript_4611~~R_Transcript_4611.p1 ORF type:5prime_partial len:114 (+),score=17.15,CK2S|PF15011.2|2.5e-19 R_Transcript_4611:2-343(+)
TTGGTTAGAAGGTGGTGTGATTTTGAATTCCCTAAAACAATAGAAGTTGATACTGTTTGTAGGGAAGGCTTCCATGGAGTTGTGTTGTCACTCGAAAAGATGGTCCGAGATAGTAAGCAGCTTGTCAGAGGAGGGTCTCAACCAGTTTCTGTTAAACAACTGCGACAAAGATTGGGTGTCAAACCAAGCCTTTCAGATTGCTTAGATGGGCTCACTATCCTACATGAGATGCATAATTCAGAGTACCTTCTTAAAACATCAGTGATTTCAGCACTCTTGAAAATTGCTTTGAAACCCAGGTGCTTGGCATATGCAAGGGGTCCATATACTATTGTCAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4611.p1 GENE.R_Transcript_4611~~R_Transcript_4611.p1 ORF type:5prime_partial len:114 (+),score=17.15,CK2S|PF15011.2|2.5e-19 R_Transcript_4611:2-343(+)
LVRRWCDFEFPKTIEVDTVCREGFHGVVLSLEKMVRDSKQLVRGGSQPVSVKQLRQRLGVKPSLSDCLDGLTILHEMHNSEYLLKTSVISALLKIALKPRCLAYARGPYTIVN*

Click here to download the sequence:
Link to NCBI Protein BLAST