Transcript Information: R_Transcript_461121.p2


Annotated TAIR IDAT3G12760.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast hits to 855 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:4054963-4056826 | Forward length=250
E-Value5E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.23329222684776
Replicate 30.25451930662392
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_461121.p2 GENE.R_Transcript_461121~~R_Transcript_461121.p2 ORF type:internal len:90 (+),score=16.64,Cullin_binding|PF03556.11|3.2e-14 R_Transcript_461121:3-269(+)
AAGAAGGAGGTGCAAAGGGACGATGTCTTCAGAGTTTTCTACAACTGGGTCTTCAAGTACATGAGAGGTGACAAGAAGAAACTCGAAACCGAACAGTGCAAAACTCTCTGGGATCTCTTGTTGAAACCAAAAAATTGGGCTTTGTATAAAGATTGGAATGATTATTTGAATGACAAGAAACTTGCTTCCATTTCTGAGGATTGTTGGAAGATGATGATTGAGTTCAGCTTTCAATGCTCTAAGAACGTCGACAACTATGATGACAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_461121.p2 GENE.R_Transcript_461121~~R_Transcript_461121.p2 ORF type:internal len:90 (+),score=16.64,Cullin_binding|PF03556.11|3.2e-14 R_Transcript_461121:3-269(+)
KKEVQRDDVFRVFYNWVFKYMRGDKKKLETEQCKTLWDLLLKPKNWALYKDWNDYLNDKKLASISEDCWKMMIEFSFQCSKNVDNYDDK

Click here to download the sequence:
Link to NCBI Protein BLAST