Transcript Information: R_Transcript_46208.p1


Annotated TAIR IDAT1G17760.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)CSTF77, ATCSTF77
Annotation TypeOrtholog
Chromosome Positionchr1:6110208-6116271 | Reverse length=734
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.454098024064
Replicate 29.0908914671103
Replicate 310.992777559548
Condition 2: 8 Hour
Replicate 19.6499253277347
Replicate 211.839877114301
Replicate 314.477491044411
Condition 3: 24 Hour
Replicate 116.095084691809
Replicate 212.32847581417
Replicate 314.875423962811


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_46208.p1 GENE.R_Transcript_46208~~R_Transcript_46208.p1 ORF type:complete len:746 (+),score=152.95,Suf|PF05843.10|1.3,Suf|PF05843.10|1.3e+02,Suf|PF05843.10|21,Suf|PF05843.10|3.8e-71,Suf|PF05843.10|9.8e+02,TPR_14|PF13428.2|80,TPR_14|PF13428.2|2.1e-06,TPR_14|PF13428.2|7.9,TPR_14|PF13428.2|4.8e+03,TPR_14|PF13428.2|3.7e+02,TPR_14|PF13428.2|12,TPR_16|PF13432.2|8,TPR_16|PF13432.2|0.0034,TPR_16|PF13432.2|0.0048,TPR_16|PF13432.2|6e+02,TPR_16|PF13432.2|9.2e+02,TPR_16|PF13432.2|8.1,TPR_15|PF13429.2|8.6e+02,TPR_15|PF13429.2|0.033,TPR_15|PF13429.2|0.0043,TPR_19|PF14559.2|0.023,TPR_19|PF14559.2|0.067,TPR_19|PF14559.2|0.0047,TPR_19|PF14559.2|2.6e+03 R_Transcript_46208:337-2574(+)
ATGGCTGATAATAGCAATACTAATAACAATAAATACAATGTTGAGGCCGCTGAGATTTTGGCTAATGAGGCACTGCATTTGCCAATAAACGAGGCGGCCCCTATATACGAGCAACTTCTAGGTATATACCCTACTGCTGCAAAATTTTGGAAGCAGTATGCGGATGCTCAAATGGCTATTAATAATGATGATGCAACAAAACAGATCTTTAGCCGTTGCCTATTAAACTGTCTCAATGTTCCTCTTTGGAGATGTTACATTCGTTTTATAAAGAAGGCCAATGAGAAGAAGGGTTTTGAGGGTCAAGAAGAGACAAGGAAAGCCTTTGATTTTATGCTGAACTTTGTTGGTGTGGATATTGGTTCTGGCCCTGTATGGATGGAGTACATCAGTTTTTTAAAGTCCTTACCGGCCCATACAGCACAGGAAGAGACTCAACGAATGATTTCTGTACGGAAAGCTTATCAAAAAGCTATTGTCACTCCGACTCACCATGTTGAACAACTATGGAAGGAATATGAGAATTTTGAAAATTCTGTTAGCCGTGCATTGGCTAAAGGGCTTATTTCTGATTACCAGCCAAAATACAACAGTGCAAGAGCTGTATACAGAGAGCGGAAGAAATACATTGATGAAATTGATTGGAATATGCTAGCAGTTCCGCCTGCTGGGTCTTGCAAGGAGGAGCAACAATGGGTGGCATGGAAAAGGCTTTTAGCATTTGAAAAAGGGAACCCACAGAGGATTGACAGTGCATCTTCGAACAAGAGAATTGTCTTCACCTATGAGCAGTGTCTGATGTACTTATACCATTATCCTGATATATGGTATGACTATGCTACATGGCATGCAAAAAGTGGTTCCATAGATGCGGCTATCAAAGTTTATCAGAGAGCTATTAAGGCCCTTCCAGATTCTGATATGTTAAAATATGCTTATGCTGAACTGGAGGAATCGCGTGGAGCAATCCAGCCTGCAAAGAAAATTTATGAGAACTTGTTGGAGGACTGTGTGAATGCAACAGCCCTTGCCCATATTCAGTTTATGAGGTTTCTTAGACGAACAGAAGGAGTTGAAGCAGCCCGCAAATACTTTCTGGATGTCAGAAAGTCACCAAATTGCACATATCATGTATATGTTGCATATGCTATGATGGCCTTTTGTCTTGACAAAGATCCTAAGATTGCGCATAATATATTCGAAGCAGGACTGAAACGATTTATGCATGAACCAGGATACATTCTTGAATATGCAGATTTTCTATCACGTCTCAATGATGATAGAAATATCAGAGCCTTGTTTGAGCGTGCTCTCAACTCCCTTCCTCCCGAGGAATCTGTAGAGGTTTGGAAGCAATTTGCGGAATTCGAGCAAACATATGGAGATCTTGCTAGCATGCTTAAGGTCGAGCAAAGAAGGAAAGAGGCTCTTTCTAGGACCAGTGATGATGGAGCCGCCGTGCTGGAGGATTCACTTCAGGATGTCATTTCACGATACAGTTTTATGGATCTTTGGCCATGTTCTGCCAAGGATTTGGATCATTTAGCACGGCAGACGTGGCTAGCTAAGAACATGAACAAGAAAGCAGAGAAGCCTGGTTTACCAAATGGAGTTGGCGCTGCAGGTGAAGAAAAAGGTGCCTCGGGATTGACTAATTTGTCGGATCAATCTTCAAAAGTTGTTTATCCAGATATTACCCAGATGGTGATTTATGAGCCAGGGCAAAAATCTGGGACTGGAGTTCTTCCCAGTGGAGCAGCAGTTGTCCCCAGTACCTTGTCAACATATGATGGGATTCTTAAGGCTGCTCCCCCTGCGCTTGTAGCATTTATAGCCAACCTTCCTGCTGTTGAAGGTCCAGCTCCAGATGTAGATTTTGTTCTTTCAATTTGTTTACAAAGCAGCACTGCAGCACCCCAGCCTATTAAACATGCAGCCTCAGCAACACATGTACCTACTGGTGCTGCTCCTAGTTTAAGTGAGCCTTCTGGTTCAAACAAATCCCGCCCTGTTCAAAGTGGCGCGTCTGCGAGAATGACAAGAGATAGATCATCTGGGAAGAGGAAAGACGCAGGGAGGCAAGATGATGATGAAACTACGAGTGTTCAGAGCGTGCCACTTCCTAAAGATGTCTTCCGTATACGCCAAATGCAGAAAGCTCGCGGAGGAACCACTTCACAGACGGGATCAACGTCATATGGAAGTGCTTTTTCTGAACATTCTGGGAGCACTAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_46208.p1 GENE.R_Transcript_46208~~R_Transcript_46208.p1 ORF type:complete len:746 (+),score=152.95,Suf|PF05843.10|1.3,Suf|PF05843.10|1.3e+02,Suf|PF05843.10|21,Suf|PF05843.10|3.8e-71,Suf|PF05843.10|9.8e+02,TPR_14|PF13428.2|80,TPR_14|PF13428.2|2.1e-06,TPR_14|PF13428.2|7.9,TPR_14|PF13428.2|4.8e+03,TPR_14|PF13428.2|3.7e+02,TPR_14|PF13428.2|12,TPR_16|PF13432.2|8,TPR_16|PF13432.2|0.0034,TPR_16|PF13432.2|0.0048,TPR_16|PF13432.2|6e+02,TPR_16|PF13432.2|9.2e+02,TPR_16|PF13432.2|8.1,TPR_15|PF13429.2|8.6e+02,TPR_15|PF13429.2|0.033,TPR_15|PF13429.2|0.0043,TPR_19|PF14559.2|0.023,TPR_19|PF14559.2|0.067,TPR_19|PF14559.2|0.0047,TPR_19|PF14559.2|2.6e+03 R_Transcript_46208:337-2574(+)
MADNSNTNNNKYNVEAAEILANEALHLPINEAAPIYEQLLGIYPTAAKFWKQYADAQMAINNDDATKQIFSRCLLNCLNVPLWRCYIRFIKKANEKKGFEGQEETRKAFDFMLNFVGVDIGSGPVWMEYISFLKSLPAHTAQEETQRMISVRKAYQKAIVTPTHHVEQLWKEYENFENSVSRALAKGLISDYQPKYNSARAVYRERKKYIDEIDWNMLAVPPAGSCKEEQQWVAWKRLLAFEKGNPQRIDSASSNKRIVFTYEQCLMYLYHYPDIWYDYATWHAKSGSIDAAIKVYQRAIKALPDSDMLKYAYAELEESRGAIQPAKKIYENLLEDCVNATALAHIQFMRFLRRTEGVEAARKYFLDVRKSPNCTYHVYVAYAMMAFCLDKDPKIAHNIFEAGLKRFMHEPGYILEYADFLSRLNDDRNIRALFERALNSLPPEESVEVWKQFAEFEQTYGDLASMLKVEQRRKEALSRTSDDGAAVLEDSLQDVISRYSFMDLWPCSAKDLDHLARQTWLAKNMNKKAEKPGLPNGVGAAGEEKGASGLTNLSDQSSKVVYPDITQMVIYEPGQKSGTGVLPSGAAVVPSTLSTYDGILKAAPPALVAFIANLPAVEGPAPDVDFVLSICLQSSTAAPQPIKHAASATHVPTGAAPSLSEPSGSNKSRPVQSGASARMTRDRSSGKRKDAGRQDDDETTSVQSVPLPKDVFRIRQMQKARGGTTSQTGSTSYGSAFSEHSGSTS*

Click here to download the sequence:
Link to NCBI Protein BLAST