Transcript Information: R_Transcript_46254.p1


Annotated TAIR IDAT5G04020.1
Annotated Gene Namecalmodulin binding
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1081980-1086546 | Reverse length=1495
E-Value9.7E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9512177030526
Replicate 21.0569921278559
Replicate 31.3667164755939
Condition 2: 8 Hour
Replicate 10.97395609485624
Replicate 21.2368666773558
Replicate 31.4778502121011
Condition 3: 24 Hour
Replicate 11.3412267740237
Replicate 21.2884986548877
Replicate 31.373932985318


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_46254.p1 GENE.R_Transcript_46254~~R_Transcript_46254.p1 ORF type:complete len:1609 (+),score=478.73,CaM_binding|PF07839.7|8.6e-09,CaM_binding|PF07839.7|1.2e+04,CaM_binding|PF07839.7|3.9e+03,CaM_binding|PF07839.7|3.7e-24,CaM_binding|PF07839.7|1.2e+04,CaM_binding|PF07839.7|3.9e+03,CaM_binding|PF07839.7|8.7e-23,CaM_binding|PF07839.7|1.1e+04,CaM_binding|PF07839.7|3.8e-15,CaM_binding|PF07839.7|1.2e+04,CaM_binding|PF07839.7|1.2e-19 R_Transcript_46254:538-4827(+)
ATGGCCACTATCCTCTCTGACAAACAAAAGTATACCAGTATGTGGCGCCTGATCTATCAACATGCCATATCAAGTGAAGCATCAATTGCTGCAAAACAGGGAGGCAATGAGGTTGACGACGATGAATATGGTGAAGAAGCAAGCAAATCCCAAGAGAACAATGAGTTCAATTCGACTCAGAGTAATCACATCACAAATCAGAAGGAAAACAAAGACAGCCAGAATGCAGCTTGTGAAAGGAGCAATATTGATCAATCAGCTGCCATCAAGTTGGTGAAAGATGCAATTAGTAAAATCATACAACAGATATCTGATGAACAATCCTTTCAAGACCCACACATTAGCGCTGATATTGGTGGAGAACTTGGCAATAGAGGGGCTCCAATTTCTACTGAAGTAAATGCCAGAGGGAAGAGGGGGGATAACCACAGAAGTCCAGACACAGAAGATAAGCTGCACTTAGTGAAGAACACAAATGCCCCACTAGGAAAGCAAGCAAAGCCAGATGAAGTGCAGATATCCCAAGGAAAAACTTCAAAGAGTTATAGCAAGCTGAAAAAATTTGTTGCAGCTGCCAACTTCATCAAGGCTATGGAGAGATTGAAGAGGAGAAGCCCACGCAAGCCACGCTTTCTGTCTCCTGAGGCAGTCTCAGAGGAAGAAAGAGTTCATCTGAGGCATCAAGACATCAATGAAAGGAGGAATGATGAAGAATGGATGCTTGATTATGCACTTAGGCAGGTAATTTCCAAGCTGGATCCTGATCAGCAAAGAACAGTGGCATCACTTGTAGAAGCATTTGAAACAGTAACCCCTGAGCAGCAACAGTACAGCATTAGATGTTATCCCTTGACAAGTGAATATGCTCCAGATGTCAGATCGCCCAAACTCACAGGCAAAGCCCAGAAACAATTTGTTGGAACTAACCAAGAAAGATCCATATCTGATGAACAGGTTCCTCAAAAGCCAGATACTGGATTCCTGCTATCAAGCATAGGCACTCGGGAGCAAAGGACTCTCCATGAAGCTCATGATCATCAAGAGAGGGCATCAGATGAGGAAACTCAGCAAGATGCTGAAAATACTGGATTTCCAGATTCAAATTTGAAATTATCTGAAGACAGCTCAAAATCAACTTCTGTTGACGTGGTGCTTAAGGATCCAACTACTGAGGATGGAGAAACAACAACTGTCGTCAAAGCCCCTACTCAAATGCCAATTAAGGATTATGAGATCAGTCTTGCTTGTGAAATGGCCACTATCCTCTCTGACAAACAAAAGTATACCAGTATGTGGCGCCTGATCTATCAACATGCCATATCAAGTGAAGCATCAATTGCTGCAAAACAGGGAGGCAATGAGGTTGACGACGATGAATATGGTGAAGAAGCAAGCAAATCCCAAGAGAACAATGAGTTCAATTCGACTCAGAGTAATCACATCACAAATCAGAAGGAAAACAAAGACAGCCAGAATGCAGCTTGTGAAAGGAGCAATATTGATCAATCAGCTGCCATCAAGTTGGTGAAAGATGCAATTAGTAAAATCATACAACAGATATCTGATGAACAATCCTTTCAAGACCCACACATTAGCGCTGATATTGGTGGAGAACTTGGCAATAGAGGGGCTCCAATTTCTACTGAAGTAAATGCCAGAGGGAAGAGGGGGGATAACCACAGAAGTCCAGACACAGAAGATAAGCTGCACTTAGTGAAGAACACAAATGCCCCACTAGGAAAGCAAGCAAAGCCAGATGAAGTGCAGATATCCCAAGGAAAAACTTCAAAGAGTTATAGCAAGCTGAAAAAATTTGTTGCAGCTGCCAACTTCATCAAGGCTATGGAGAGATTGAAGAGGAGAAGCCCACGCAAGCCACGCTTTCTGTCTCCTGAGGCAGTCTCAGAGGAAGAAAGAGTTCATCTGAGGCATCAAGACATCAATGAAAGGAGGAATGATGAAGAATGGATGCTTGATTATGCACTTAGAAAGGTTATTTCGAACCTGCATCCGGATCAGCAGAGAAAAGTGGCAAAACTTGTAGAAGCATTTGAAGCAATTACACCAGAGCAGAACGACGATTCCACCAGAAGTCAAACTAGAGCTGAACTACCCCCTGAAGTTGCAGAGCCTAAGCATCACAAGTCCACATCATATGAGGACAATGTTCAGACATGTCATGATGACATATTCAGCTCGCAGAGTCAGCAAGACAATTATCCCATAGATATTTCAAAATGCAGGACAGAGCAACATGATGAGGATCTTGATTCAGATGGAACCAATATGCACGCTTACAATCAATTGAGGCCAAAAGTTACAAAAGAGGAGACAGATTCCAACCCGATGTGTGAATCTCTTCAACAAGCTTGTTTAAACAAGGAGACTAAACAAGAAAGTGAGGCTAAGATGAAAAAAAGCATGTTTTCTGGCTCACAGAAACATACCACAATGTGGCACCTGATATATCAGCATGTCAAATCAGTCACTTCTGCAGAAACTGGAAGCAACCTAGGTGAAAGAGTGGCCAATGAAGATCTGATGACCAGTGGCAATGCATTATCTGAGACAAATTCGGATGTAGATGATAATGACACAAGTAGTGTGGCCAGTGAACTCACTGAGAACGATGCCATTAAACTGGTAAAAGAGGCCATTGATGGTATCCTTGATGTGCCACTAGAGCAGGATAATGATTTGCTTTCTAGCAACATCACAGCTGTGCCAGAAGAAGACCAAAGAGCAACAGTAGGAGAAAAGCCTGAGAGAAGCCTGTCCAGGGGGTACAGCAAGCTCAGGAAATTAATTATCTGCAACAAATTTATCAGGGCAATGGAGAAGATGAGAAAGTCCTGCCCACAGAAGCGCCAAAATCTAATGATGAATCCTGACCAAGAATCTGAAAAGGCTCATCTAAAGCCTTGTATAGCAGGTGAGAAAAACACAGACAACTGGATGCTTGACTATGCGCTACAGAAAGTTATCGCCGGACTTGCTCCAGTGCAACAAAGAAGAGTTGCCATGTTGGTAGAAGCTTTTGAAAAGGTCAATCCTGATGTCCAAGAAACTGGCCAAGCATTTGATGGCATTAAAAATGAATCCACTGATGGTGGTTCCTCAACTGACAATTCATCGGAGAACTCAAGTGAAGTTCCTGATAGTTCAGTGAAGCTAGGAGACTCACTAGTAACATCTAGCAGTGAAACATACACAGGCAGGGCACCACAAGAAATTAAAGAAGGTACAACTTCAAGAAACGAATGTGAGTTAATAGGGCAAGAATCCAGAAGTGATGAACCTTCTAGCAGCACAGTGGCAACATCTGCTACAATTGAAACCATACCAGATCTTCATAAAGATACGAAAGAAGTCAAGTCTGCAGAAGTTCCGCATTCTAATGTTCCATTGGAGGAAAACAGTTCAAGTGATGAAAACTTGGATGATTATAATGACCAAGAGACTGAATCAACAGCAGAGCCCTCTCTACATGAAGACTTGGAAGACGACTGCAATTCTAGCACAGAAAATAGCACATCCATAAACAGGAAAAGCTATACCAATCTGTGGTGTCTATTAGCCCAGCATCTCAAGTCTGATGTTCCGGAGGAAAAGGAGAAGCAATTACCATGTGAGATCGATGCAGTTGCAGAAGATGCCAAAGTAATCCATGATGTAGATGTGGACGTCAAAACTCCAAAGTCAACAAGCTTTGAATTCCAGCAAAAGGAAGCAATTAAGCTGGTACAGGAAGCACTTGATGAAATCCTTGGTCTTCCAGACCAAACATTTGATGATCAAACCATGCATACTAGTGGAACAGATCAAGAGATTTGCAATGGAAAACATGGAGATGGAAGGGAGCCATCACCTTCCACAGAAGAACTTGCAGGAGCTGAAACTTTGCAGGACACTGCTGCAATCCCTCAAGAAGAGATTACATCACCGAAAGAAAAGGCACCCAACAGTTACAGCATGCTTTCCAAAGTCATTCTGTGTAAGAGATTTATCAAGGCAATGAACCAAATGCAAAAGCTCAAACCACAAAGTCCATCATATCAATCTCCACAGCTTCAGTCAGAAGCCGAGAGCTTTCAGGCTCTGCGCCCATCAGCAGCCAATGGGAAGAAAAGCTGGGAGGAGTGGATGCTTGATCATGCAATGCAGCAAGTTGTTGGAAAACTTGCTCCAGCTCAGAAGAAAAAGGTATCATTGCTTGTTCAGGCTTTTGAAACAGTTGGCTCAGAGCCAGAACACAGACCCAGCTGGAAAGTCAAAGCGGCAGCCCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_46254.p1 GENE.R_Transcript_46254~~R_Transcript_46254.p1 ORF type:complete len:1609 (+),score=478.73,CaM_binding|PF07839.7|8.6e-09,CaM_binding|PF07839.7|1.2e+04,CaM_binding|PF07839.7|3.9e+03,CaM_binding|PF07839.7|3.7e-24,CaM_binding|PF07839.7|1.2e+04,CaM_binding|PF07839.7|3.9e+03,CaM_binding|PF07839.7|8.7e-23,CaM_binding|PF07839.7|1.1e+04,CaM_binding|PF07839.7|3.8e-15,CaM_binding|PF07839.7|1.2e+04,CaM_binding|PF07839.7|1.2e-19 R_Transcript_46254:538-4827(+)
MATILSDKQKYTSMWRLIYQHAISSEASIAAKQGGNEVDDDEYGEEASKSQENNEFNSTQSNHITNQKENKDSQNAACERSNIDQSAAIKLVKDAISKIIQQISDEQSFQDPHISADIGGELGNRGAPISTEVNARGKRGDNHRSPDTEDKLHLVKNTNAPLGKQAKPDEVQISQGKTSKSYSKLKKFVAAANFIKAMERLKRRSPRKPRFLSPEAVSEEERVHLRHQDINERRNDEEWMLDYALRQVISKLDPDQQRTVASLVEAFETVTPEQQQYSIRCYPLTSEYAPDVRSPKLTGKAQKQFVGTNQERSISDEQVPQKPDTGFLLSSIGTREQRTLHEAHDHQERASDEETQQDAENTGFPDSNLKLSEDSSKSTSVDVVLKDPTTEDGETTTVVKAPTQMPIKDYEISLACEMATILSDKQKYTSMWRLIYQHAISSEASIAAKQGGNEVDDDEYGEEASKSQENNEFNSTQSNHITNQKENKDSQNAACERSNIDQSAAIKLVKDAISKIIQQISDEQSFQDPHISADIGGELGNRGAPISTEVNARGKRGDNHRSPDTEDKLHLVKNTNAPLGKQAKPDEVQISQGKTSKSYSKLKKFVAAANFIKAMERLKRRSPRKPRFLSPEAVSEEERVHLRHQDINERRNDEEWMLDYALRKVISNLHPDQQRKVAKLVEAFEAITPEQNDDSTRSQTRAELPPEVAEPKHHKSTSYEDNVQTCHDDIFSSQSQQDNYPIDISKCRTEQHDEDLDSDGTNMHAYNQLRPKVTKEETDSNPMCESLQQACLNKETKQESEAKMKKSMFSGSQKHTTMWHLIYQHVKSVTSAETGSNLGERVANEDLMTSGNALSETNSDVDDNDTSSVASELTENDAIKLVKEAIDGILDVPLEQDNDLLSSNITAVPEEDQRATVGEKPERSLSRGYSKLRKLIICNKFIRAMEKMRKSCPQKRQNLMMNPDQESEKAHLKPCIAGEKNTDNWMLDYALQKVIAGLAPVQQRRVAMLVEAFEKVNPDVQETGQAFDGIKNESTDGGSSTDNSSENSSEVPDSSVKLGDSLVTSSSETYTGRAPQEIKEGTTSRNECELIGQESRSDEPSSSTVATSATIETIPDLHKDTKEVKSAEVPHSNVPLEENSSSDENLDDYNDQETESTAEPSLHEDLEDDCNSSTENSTSINRKSYTNLWCLLAQHLKSDVPEEKEKQLPCEIDAVAEDAKVIHDVDVDVKTPKSTSFEFQQKEAIKLVQEALDEILGLPDQTFDDQTMHTSGTDQEICNGKHGDGREPSPSTEELAGAETLQDTAAIPQEEITSPKEKAPNSYSMLSKVILCKRFIKAMNQMQKLKPQSPSYQSPQLQSEAESFQALRPSAANGKKSWEEWMLDHAMQQVVGKLAPAQKKKVSLLVQAFETVGSEPEHRPSWKVKAAAL*

Click here to download the sequence:
Link to NCBI Protein BLAST