Transcript Information: R_Transcript_462783.p2


Annotated TAIR IDAT1G17730.1
Annotated Gene Namevacuolar protein sorting 46.1
Annotated Gene Symbol(s)VPS46.1, CHMP1B
Annotation TypeHomolog
Chromosome Positionchr1:6099210-6100153 | Forward length=203
E-Value3E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.24414302809649
Replicate 30
Condition 2: 8 Hour
Replicate 10.28471935985169
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.26695124683377
Replicate 20.76936949618293
Replicate 35.5991802687412


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_462783.p2 GENE.R_Transcript_462783~~R_Transcript_462783.p2 ORF type:5prime_partial len:86 (+),score=11.67 R_Transcript_462783:2-259(+)
AGCAGAAGACGGCATACGAGATGTGCGGACGTGACTGGAGTTCAGACGTGTGCTCTCCGATCTCGCATTTCTTGGCTTGTCTTTGTAGGGACTTTGATGTCATCTTCAGCTCTATTACCTGATTCATTAGCTTCTCTGTGCTTCCTCCCATTATGTTTGATAGTATTTGATAATTCTGGGATTGAATTGAATGATCAAAGTGATGTTCAATTATGTAGTGATGATGAGAATTTTTCCAAGGAGCTTCAAGGTAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_462783.p2 GENE.R_Transcript_462783~~R_Transcript_462783.p2 ORF type:5prime_partial len:86 (+),score=11.67 R_Transcript_462783:2-259(+)
SRRRHTRCADVTGVQTCALRSRISWLVFVGTLMSSSALLPDSLASLCFLPLCLIVFDNSGIELNDQSDVQLCSDDENFSKELQGK*

Click here to download the sequence:
Link to NCBI Protein BLAST