Transcript Information: R_Transcript_46281.p1


Annotated TAIR IDAT5G47870.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: cobalt ion binding (TAIR:AT1G71310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19384555-19385808 | Reverse length=199
E-Value7.7E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 189.966816439036
Replicate 295.369862335363
Replicate 391.932373552558
Condition 2: 8 Hour
Replicate 182.054854089879
Replicate 295.008902400771
Replicate 390.516031626996
Condition 3: 24 Hour
Replicate 179.382995658461
Replicate 282.437656564336
Replicate 377.628392622863


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_46281.p1 GENE.R_Transcript_46281~~R_Transcript_46281.p1 ORF type:complete len:225 (+),score=38.10 R_Transcript_46281:214-888(+)
ATGGTCATGGCACTCCAAAACACGACGAATTTCCTGTCCAAATCGGCGGCACCGGGCTCGACGGAGATTGGGTTCCCTGTTAAACTGAAGCACTCGCTGTCATGCCGCGTCTCGTTTCCTTCGGTGAGATTGTCTTGCCCGCAAAGGCAGAGGCAGGGGAACTTCATCGTTGCTTCTGTAGATAACAAGAGCAGCGGCGGCGGTGGAAGCGGAAGCGGAAGTAGCAGCGGAAGTGCGGCTGGTGGTGGTAGTGATGCCAAGAAGGCGGCAGTTCCCAACTCAAATTACGTGGTACCGCTTGATAAGGCTGCCTCTTGCATCACTCGCCCACTTGCTGAGATCCTAAGAGATCTCAACAAGAGGATTCCTGATAACATCCTCAAGCCCCATTCTAAAATCATTCCCTGGTATCATGCCAACCGGATGCTGAGTTTCTATGCCCCAGGTTGGTGTGGAGAAGTACGTGATGTCATCTTCTCTGACGATGGGAGTGTAACAGTAGTCTACCGTGTCACCATAAGAGGATCTGATGGAGAGGCATATCGTGAATCTACTGGAACAATTTTGTCCAATGACCCCAATTCTGTTGATCCAGTTGCTGCAGCAGAGGAGATTGCTTTTGTCAGGGCCTGTGCACGTTTTGGGCTTGGCTTGTATTTGTATCATGAGGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_46281.p1 GENE.R_Transcript_46281~~R_Transcript_46281.p1 ORF type:complete len:225 (+),score=38.10 R_Transcript_46281:214-888(+)
MVMALQNTTNFLSKSAAPGSTEIGFPVKLKHSLSCRVSFPSVRLSCPQRQRQGNFIVASVDNKSSGGGGSGSGSSSGSAAGGGSDAKKAAVPNSNYVVPLDKAASCITRPLAEILRDLNKRIPDNILKPHSKIIPWYHANRMLSFYAPGWCGEVRDVIFSDDGSVTVVYRVTIRGSDGEAYRESTGTILSNDPNSVDPVAAAEEIAFVRACARFGLGLYLYHED*

Click here to download the sequence:
Link to NCBI Protein BLAST