Transcript Information: R_Transcript_462917.p2


Annotated TAIR IDAT5G46860.1
Annotated Gene NameSyntaxin/t-SNARE family protein
Annotated Gene Symbol(s)VAM3, ATVAM3, SYP22, ATSYP22, SGR3
Annotation TypeHomolog
Chromosome Positionchr5:19012342-19013795 | Reverse length=268
E-Value2E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.42448746406323
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.26001025396727
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_462917.p2 GENE.R_Transcript_462917~~R_Transcript_462917.p2 ORF type:5prime_partial len:86 (+),score=4.78,SNARE|PF05739.15|3.8e-16 R_Transcript_462917:2-259(+)
AAGATTGAGGGCGACATTGTCGAGGTGAATCAAATCTTCAAGGACCTGGCGACGATGGTGCACGACCAAGGCGAGGTGATTGACAGCATCGAGGCGAACATTGAGTCGAGCAGCATTCAGATTAATGAGGGCACGACGCAGCTGATCAAGGCCAGCAGCTATGCGCAAGCGGCTCGCAAGAAGAAGTTCATGATCATCCTCATTCTCATTGTCGTCCTTCTGGTCATCGTTGGCATCGTCTACATTAGCAGCAGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_462917.p2 GENE.R_Transcript_462917~~R_Transcript_462917.p2 ORF type:5prime_partial len:86 (+),score=4.78,SNARE|PF05739.15|3.8e-16 R_Transcript_462917:2-259(+)
KIEGDIVEVNQIFKDLATMVHDQGEVIDSIEANIESSSIQINEGTTQLIKASSYAQAARKKKFMIILILIVVLLVIVGIVYISSR*

Click here to download the sequence:
Link to NCBI Protein BLAST