Transcript Information: R_Transcript_463164.p1


Annotated TAIR IDAT5G23250.1
Annotated Gene NameSuccinyl-CoA ligase, alpha subunit
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7830460-7832491 | Forward length=341
E-Value1.3E-117
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.40925921423136
Replicate 20.376615254104
Replicate 30.41088318558121
Condition 2: 8 Hour
Replicate 10.10980208496523
Replicate 20.20054602548149
Replicate 30
Condition 3: 24 Hour
Replicate 10.20589961639196
Replicate 20
Replicate 30.39260456837484


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_463164.p1 GENE.R_Transcript_463164~~R_Transcript_463164.p1 ORF type:complete len:223 (+),score=56.88,Ligase_CoA|PF00549.15|3.8e-20,Succ_CoA_lig|PF13607.2|1.2e-08 R_Transcript_463164:25-669(+)
ATGGAAGCATTAGAAGCAGAGATTGATCTTGTTGTTTGTATCACAGAAGGAATCCCACAACAAGATATGGTCAAAGTCAAGAGTGCCTTAATGTCTCAAAATAAAACTCGACTAATTGGTCCAAACTGCCCAGGTATTATCAAACCCGGTGAATGCAAGATTGGTATTATGCCTGGTCACATCCATTTACCAGGAAAAATTGGTATTGTATCTCGATCTGGTACTTTAACATACGAAGCTGTTGCTCAAACCACTGTCACTAAACTTGGCCAAAGTACTTGTGTTGGTATTGGAGGAGATCCTTTCAATGGTACTAACTTTGTTGATGTTCTTGAACGATTCAGAGAAGATCCTCAAACTGAAGGTATTATTTTGATTGGTGAAATTGGAGGTACTGCCGAAGAAGAAGCTGCTGAATTCCTTATTAAAAACCCCACATCTAAACCTGTTGTATCCTTCATTGCTGGTTTGACTGCACCACCAGGAAGACGAATGGGTCATGCTGGAGCAATTATTTCAGGTGGAAAAGGAGGTGCTACTGAAAAGATTCGTGCACTTAAAAATGCTGGTGTTGTTGTTGCCGACTCTCCCGCTCGTATTGGAGAGACTATTTACGGAGAAATGAAACGACTTGGTAAAATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_463164.p1 GENE.R_Transcript_463164~~R_Transcript_463164.p1 ORF type:complete len:223 (+),score=56.88,Ligase_CoA|PF00549.15|3.8e-20,Succ_CoA_lig|PF13607.2|1.2e-08 R_Transcript_463164:25-669(+)
MEALEAEIDLVVCITEGIPQQDMVKVKSALMSQNKTRLIGPNCPGIIKPGECKIGIMPGHIHLPGKIGIVSRSGTLTYEAVAQTTVTKLGQSTCVGIGGDPFNGTNFVDVLERFREDPQTEGIILIGEIGGTAEEEAAEFLIKNPTSKPVVSFIAGLTAPPGRRMGHAGAIISGGKGGATEKIRALKNAGVVVADSPARIGETIYGEMKRLGKI*

Click here to download the sequence:
Link to NCBI Protein BLAST