Transcript Information: R_Transcript_46320.p2


Annotated TAIR IDAT5G27260.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:9603943-9604930 | Forward length=303
E-Value8E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.506149318774
Replicate 216.797040333038
Replicate 315.658635550803
Condition 2: 8 Hour
Replicate 112.206386406537
Replicate 213.950520312859
Replicate 313.816897636414
Condition 3: 24 Hour
Replicate 115.350891997032
Replicate 212.574789397314
Replicate 316.203435111494


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_46320.p2 GENE.R_Transcript_46320~~R_Transcript_46320.p2 ORF type:complete len:335 (+),score=77.83 R_Transcript_46320:1910-2914(+)
ATGTGGAATCCTATTAGGATGGAAGCTAGTAGCCATCAAAGTGGGCGGGGGAAAAACAAGCGGTATTGGAAAAAGGATGAGGAAGAGGTTCTACTCGATACTTTGGAGGAGATAAGTAAGGATCCTACATGGAAAGGGGAAGGAGGTTTCAAGAATGGGTTCATGGTCCATTTAGCGAATGTGTTAAATGAAAAGTTCCCTGGTGCTGGTCTTAAGGCAGTGCCTCATATTGACTCTAAGCTAAAATGGTTTAAAGACAAGCACAATGTGATTCATGAGATGCTGAAACTTCCCGGCTTCAAATGGTGTGACAAAACCAAGACTGTGAAATCTGATAAACAAGTTTTTGACGATTTTGTCAAGAAACACCCCAAAGCAGCCGGATTATGGAATACCCCGTTCCCCTTCCTGGATAAGTTGGATAGTATCTATGGTATTGATCGAGCTAACGGTCAAACATGTGAGATGGTGGAAGATTCTGTGGAGAACTGTGAGCAGGATGTTGGCGAGTTAAACCTTGATCTTGAGGGAGAGGATAACACTTTAGACAACGATTCAACGAATCATGTTCCATTGCATATCTCACCTCCTACCAAGAAAGCAAGGAAAGAGAGTGCTCCTAAAAGCAAGGAGGATAAGGGAATCCTAGAGGGACTTTCAGATGCAGACTTGACTGTTGTGAATAATATAACTTCTGAATTTGGGGGTTTCTTGAAAGATGTCAATGCTCATCTGGCATCAATTGCTACTGCTATGACTGCTTGTCAACAACATGAGCAAGAAATCGTGCTTCGTGAAAAGGAACTGGTTGAACAGAAAAGGAATTTGCTAAGTGAGATAGCAACTTTGCCAGGAATCATGGATATTCAAGCAATTAGAGCTGCAAAATTGTTGGCAGCAAATCCGAGCGATATGGAGATCTATTATTCTAGCCCGTCGATTGAGTGGAAGAAGAAGTTCATAGTAGATCTTTTAGGCCTGGGCATTTCTTCTGGGGGTGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_46320.p2 GENE.R_Transcript_46320~~R_Transcript_46320.p2 ORF type:complete len:335 (+),score=77.83 R_Transcript_46320:1910-2914(+)
MWNPIRMEASSHQSGRGKNKRYWKKDEEEVLLDTLEEISKDPTWKGEGGFKNGFMVHLANVLNEKFPGAGLKAVPHIDSKLKWFKDKHNVIHEMLKLPGFKWCDKTKTVKSDKQVFDDFVKKHPKAAGLWNTPFPFLDKLDSIYGIDRANGQTCEMVEDSVENCEQDVGELNLDLEGEDNTLDNDSTNHVPLHISPPTKKARKESAPKSKEDKGILEGLSDADLTVVNNITSEFGGFLKDVNAHLASIATAMTACQQHEQEIVLREKELVEQKRNLLSEIATLPGIMDIQAIRAAKLLAANPSDMEIYYSSPSIEWKKKFIVDLLGLGISSGGD*

Click here to download the sequence:
Link to NCBI Protein BLAST