Transcript Information: R_Transcript_463371.p1


Annotated TAIR IDAT5G16486.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5383597-5384226 | Reverse length=209
E-Value4E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7764757638516
Replicate 22.7471794937212
Replicate 33.8534698759883
Condition 2: 8 Hour
Replicate 15.2633167643611
Replicate 23.5526634700949
Replicate 35.5981602847922
Condition 3: 24 Hour
Replicate 13.6475020829063
Replicate 25.3592217864954
Replicate 36.7504135950244


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_463371.p1 GENE.R_Transcript_463371~~R_Transcript_463371.p1 ORF type:complete len:107 (+),score=-0.47,zf-RVT|PF13966.2|5.8e-13 R_Transcript_463371:53-373(+)
ATGTCTGTTTTTTTTTTTTTTTTTTTTTTGAAAATCCTCAAGTGCCGAGAACTCCTCCCTACTAGCCAGCATGTTATTAGGGGGCCTGCAATCACAATCAAAGATCTCTTTAAGACTCTCCAGGGGGATTTTCCAAAGGTGGATTGGAGGAACTTGGTGTGTAGGAACCTGGCCAGACCTAAAGCTGTGTTCTCTCTCTGGCTCTTACTCAGGCAACGACACTCTACACTGGATAGAATTCGAAAATGGGGCATACAATGTGACAGTAAGTGTTATCTTTGTCACACCAAGGAGGAAACACATGAGCATCTACTCTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_463371.p1 GENE.R_Transcript_463371~~R_Transcript_463371.p1 ORF type:complete len:107 (+),score=-0.47,zf-RVT|PF13966.2|5.8e-13 R_Transcript_463371:53-373(+)
MSVFFFFFFLKILKCRELLPTSQHVIRGPAITIKDLFKTLQGDFPKVDWRNLVCRNLARPKAVFSLWLLLRQRHSTLDRIRKWGIQCDSKCYLCHTKEETHEHLLF*

Click here to download the sequence:
Link to NCBI Protein BLAST