Transcript Information: R_Transcript_46357.p1


Annotated TAIR IDAT5G01970.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30050.1); Has 240 Blast hits to 236 proteins in 72 species: Archae - 0; Bacteria - 15; Metazoa - 51; Fungi - 19; Plants - 119; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:373014-374651 | Reverse length=351
E-Value4E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.224689768667
Replicate 21.1198026888692
Replicate 32.3670295516024
Condition 2: 8 Hour
Replicate 12.6118255943728
Replicate 23.8013499130016
Replicate 32.9647630679965
Condition 3: 24 Hour
Replicate 13.5967231323403
Replicate 22.4995960075988
Replicate 32.3346884999357


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_46357.p1 GENE.R_Transcript_46357~~R_Transcript_46357.p1 ORF type:complete len:300 (+),score=49.68 R_Transcript_46357:463-1362(+)
ATGGCGTATAGGAGAAGACAAGGGATAACGAGGGCATCGACATTCAAGGAAGAGATATATCATCAAAAGAACGATATTGATGATAATTGTGAGAATCAAAATCAAATTCTAAAGGAAGATGATGAAATTAGGAACAACACAAGTAGTGGGAATGGATCATTGGCAGCAAGAGCCATGAGAGCTTCAGCTGCTCATCGAGATTCATCAGCTTATGGATATGCTTATGGTTATGGTTCTCCTGATCCTTCGTCTTCTCCGCCTTCTTCTAATTTTCTCTCTCATCCTGATAATTCCTTCCGATCCCTTTCTTTTCCCAACAAGGGATCTCTTCATTCGGAGAGCATCTCCAACAAAGACTCCAATGAAACAACATATGGCTTTTGGGGTATCCTCGCTAGGAAGGCTAAATCCATCCTTGATGACGATGATTTTGAGTCCTCTTATGGTAACAGGTTCAAGTCACAACAGTTCAATGATCCAACAACAGGGAGCCAGTTCTATCAATCTCGTCAGTATTCTGAAGGAGGTCCAAAGATGGATAATGCCAAATTGCGGAAACGCCTGGATGCCATAACAACTTCTCTCAACAACCTCGGTGACACGATTGGAACTGCTTTCGAAGAGGGTCGTACTAAAACGGCTGATATTATCCAAGAAACTCGTAATAAGACAGCAGATATCCTTCAAGAGACTCGCAAACTCCAAATTAGGAGAAGAGGAGGCAGTACAGATAGTCAGGATCAGGCAACTGTGGTGCAGAACAGTTCATGGCAGCGACCTGTTATTCAGCCTGTGCAGACGAACGCACTAGCCAACCAAGAAACACAATTGAAGGCATCTCGCGACGTAAGGTGGCAAATATGTAATCGTGTCTCGATATTATTGTGGCAACTAATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_46357.p1 GENE.R_Transcript_46357~~R_Transcript_46357.p1 ORF type:complete len:300 (+),score=49.68 R_Transcript_46357:463-1362(+)
MAYRRRQGITRASTFKEEIYHQKNDIDDNCENQNQILKEDDEIRNNTSSGNGSLAARAMRASAAHRDSSAYGYAYGYGSPDPSSSPPSSNFLSHPDNSFRSLSFPNKGSLHSESISNKDSNETTYGFWGILARKAKSILDDDDFESSYGNRFKSQQFNDPTTGSQFYQSRQYSEGGPKMDNAKLRKRLDAITTSLNNLGDTIGTAFEEGRTKTADIIQETRNKTADILQETRKLQIRRRGGSTDSQDQATVVQNSSWQRPVIQPVQTNALANQETQLKASRDVRWQICNRVSILLWQLI*

Click here to download the sequence:
Link to NCBI Protein BLAST