Transcript Information: R_Transcript_463687.p1


Annotated TAIR IDAT5G16486.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5383597-5384226 | Reverse length=209
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.66983342953096
Replicate 20.38525321864767
Replicate 31.260921335568
Condition 2: 8 Hour
Replicate 10.89856385127505
Replicate 22.05145704965
Replicate 31.4987568402154
Condition 3: 24 Hour
Replicate 11.0531104232892
Replicate 20.80936729873678
Replicate 30.80321852062009


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_463687.p1 GENE.R_Transcript_463687~~R_Transcript_463687.p1 ORF type:complete len:109 (+),score=8.82,zf-RVT|PF13966.2|2.2e-13 R_Transcript_463687:527-853(+)
ATGTTGAAAAAGATAGTGGAGATGAGAGATATAAATGTTGGGATCCTAGGGGCTATTAAAAAGACCAGCATGAAGATAAAATGCTTCTATGATCAGCTAAATAGTGTTGGAGCTAAAGTGCCCTGGTACCAACTGGTATGGATAAGTTATGCTAGGCCAAGAACAAAAGTCATCCTTTGGCTGTGGCTACTGCAGGAGCTCCTTACTAAATACAAATTAGCATACTGGAATCTGAACTGTGAACTCATTTGTCCCCTGTGTAAAGTTGAGAATGAGAGCTGTCAGCATATTCTAATTAATAGCCCTTACTCTCAAGAGGTTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_463687.p1 GENE.R_Transcript_463687~~R_Transcript_463687.p1 ORF type:complete len:109 (+),score=8.82,zf-RVT|PF13966.2|2.2e-13 R_Transcript_463687:527-853(+)
MLKKIVEMRDINVGILGAIKKTSMKIKCFYDQLNSVGAKVPWYQLVWISYARPRTKVILWLWLLQELLTKYKLAYWNLNCELICPLCKVENESCQHILINSPYSQEVF*

Click here to download the sequence:
Link to NCBI Protein BLAST