Transcript Information: R_Transcript_46378.p1


Annotated TAIR IDAT1G56460.2
Annotated Gene NameHIT zinc finger ;PAPA-1-like conserved region
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:21146765-21149468 | Forward length=532
E-Value8E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.109937425351
Replicate 27.3306048867248
Replicate 39.5773859777017
Condition 2: 8 Hour
Replicate 18.6544867485953
Replicate 28.9636293587511
Replicate 311.462116189167
Condition 3: 24 Hour
Replicate 110.984123285669
Replicate 28.4608536261266
Replicate 310.660821679394


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_46378.p1 GENE.R_Transcript_46378~~R_Transcript_46378.p1 ORF type:complete len:464 (+),score=118.39,PAPA-1|PF04795.8|1.1e+03,PAPA-1|PF04795.8|4.3e+03,PAPA-1|PF04795.8|2.1e-18,zf-HIT|PF04438.12|1.2e-06 R_Transcript_46378:438-1829(+)
ATGGAGTGGCTCAGTGTGCCTACAACCAGTGCTGGCTGTCAAGCTGTAAGGAGGAAACGTAGCGACTTTCATCGTCGACCTCATCCCAATCCAAAACCAATAATAGATGACCAGAATATTTCTGCGTGTCAGAGCTCACCAGTAGATTACAGTGAACATGGTGGCATTAGTGCCCAATCAAGGAATCTGGCTTCTGAAAGTTATAACCTACCCCCTACAAATAATGTCAGATCAATTGAAAACCATCATGATTTACCGGAGGAGCCACTACTTGATTCTGACTGTTTGGGAAAGAAGAGCAAGCTGAAAAAAGTGAAACTCAAGCTTGGCAGTGTCACCCGAACACTGCACACGAAGTCTGCATCAAATTCGCAGAAAAGGGAATTTTCTAGGAATGGCGATGATGAGGCAAAGGAGACCTCCTCAAGACTTACGCGTCGTGAAGGTCCTTCAATGAATGAAAATTATAAGCATGATCCTGCTTATAAGAGCAAGCGAGTTTCTAAGAAGCGTGTTGGAGATGAAAGATTTGATGATGAAGATGATGAGGAGATTCGTTACTTAAAGAAAGTTAGAGCTTCTAAGTTTGGCTCTGGTTTTGGTGATACGCCCGAGGAAGGCAGCAGAAAAACTAAAGGGATTGCCAAGCTTATGAATCTGAGTTATGGTGAAACAAGGGATTTTGGATCACCTGGACTTGGAAAAGAGGGCAGCAAGAAATTGAAAATGGATGAGGATAATGATTACGAAACGGAGGTGACATCAGATGATGAGCTCACAAACAAGAAGAAAAGACCCACAGAAGATATTGTTGACCCTTTTATGGGTTCTGGCCAGGAAATGACCATGACAATGCGTAAACGAGCACTTGAGTGTCCTGAACCTGGTGGTTTAGTGGAGCTTCCAAATTGTTTACCTGCTGCCTCTTCCAAAAAGCAAAAGCTGTCTGAAGTTGAGCAACAGCTGAGGAAGGCTGAGGCTGCACAAAGGCGCAGATTACAGGCGGAGAAGGCTGCCAAAGAAGCTGAGGCTGAAGCAATCAGAAAAATACTTGGACAAGATTCAAACAGGAAAAAGAAGGAAGAAAAGCTGAAGAAACAGCAGGAAGAATTGGCACTGGAGAAGACTAGCAAGGCTACGGTACTGGGACCAAATACAGTTAGATGTATCATGGGTGAACATGGGACGGTTGTTACTTTCTCTGACGATATAGGGCTACCAAAGATTTTTGACTCCGGACCATACAGGTATCCTCCACCAAGGGAGAAATGTGCTGGGCCAAATTGTACGAATGACTACAAATACCGTGATTCTAAATCAAGACTCCCACTGTGCAGTCTCAATTGCTACAAAGCTGTGCAAGGAAATATGGAACTTTTCCCTGCCTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_46378.p1 GENE.R_Transcript_46378~~R_Transcript_46378.p1 ORF type:complete len:464 (+),score=118.39,PAPA-1|PF04795.8|1.1e+03,PAPA-1|PF04795.8|4.3e+03,PAPA-1|PF04795.8|2.1e-18,zf-HIT|PF04438.12|1.2e-06 R_Transcript_46378:438-1829(+)
MEWLSVPTTSAGCQAVRRKRSDFHRRPHPNPKPIIDDQNISACQSSPVDYSEHGGISAQSRNLASESYNLPPTNNVRSIENHHDLPEEPLLDSDCLGKKSKLKKVKLKLGSVTRTLHTKSASNSQKREFSRNGDDEAKETSSRLTRREGPSMNENYKHDPAYKSKRVSKKRVGDERFDDEDDEEIRYLKKVRASKFGSGFGDTPEEGSRKTKGIAKLMNLSYGETRDFGSPGLGKEGSKKLKMDEDNDYETEVTSDDELTNKKKRPTEDIVDPFMGSGQEMTMTMRKRALECPEPGGLVELPNCLPAASSKKQKLSEVEQQLRKAEAAQRRRLQAEKAAKEAEAEAIRKILGQDSNRKKKEEKLKKQQEELALEKTSKATVLGPNTVRCIMGEHGTVVTFSDDIGLPKIFDSGPYRYPPPREKCAGPNCTNDYKYRDSKSRLPLCSLNCYKAVQGNMELFPAC*

Click here to download the sequence:
Link to NCBI Protein BLAST