Transcript Information: R_Transcript_46385.p2


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value8E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4989692494025
Replicate 23.1050866812835
Replicate 34.6781365513269
Condition 2: 8 Hour
Replicate 13.621149041494
Replicate 23.7793039731581
Replicate 33.3235343389441
Condition 3: 24 Hour
Replicate 12.748469879373
Replicate 23.1063744916306
Replicate 33.5451916042158


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_46385.p2 GENE.R_Transcript_46385~~R_Transcript_46385.p2 ORF type:complete len:142 (+),score=10.77,zf-RVT|PF13966.2|1.1e-07,zf-RVT|PF13966.2|1.2e+03 R_Transcript_46385:460-885(+)
ATGCGCCAACGTAGGCGGCCTCAGTGGTGCCTCTCGCCTGATATTTGTCTTTTGTGCCACAAGAGTGGGGAGACAGCTGCTCACCTCTTTCTCCACTGCCCGGTCGCACGTTCTATTTGGGCCTTGCTCTTTGGAATCAGGAGGGAAGCCTTTGTTTGCCCGTCTACTGTGTTGGAGTTCCTGGAGATACGCTTCTGGGGGTTTGGTAGAGATAAGGAGTTGGGGGTGTTATGGCGTAATGCTATCTTTGCTACTTTGTGGTGTATCTGGTTGGAGCGCAATGCTAGGGTGTTTCATCAGCGCGCTCTCCCTATCCCTCTCTTGTGGGAGCGGATCACCTACTTGGCCTCCTTGTGGAGTAAAGCAAGTGGAATGTTTCGTAGTTATTCTTTATCTGTTGTACAACGGAATTGGGCTTGCTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_46385.p2 GENE.R_Transcript_46385~~R_Transcript_46385.p2 ORF type:complete len:142 (+),score=10.77,zf-RVT|PF13966.2|1.1e-07,zf-RVT|PF13966.2|1.2e+03 R_Transcript_46385:460-885(+)
MRQRRRPQWCLSPDICLLCHKSGETAAHLFLHCPVARSIWALLFGIRREAFVCPSTVLEFLEIRFWGFGRDKELGVLWRNAIFATLWCIWLERNARVFHQRALPIPLLWERITYLASLWSKASGMFRSYSLSVVQRNWACL*

Click here to download the sequence:
Link to NCBI Protein BLAST