Transcript Information: R_Transcript_464044.p1


Annotated TAIR IDAT5G40580.1
Annotated Gene Name20S proteasome beta subunit PBB2
Annotated Gene Symbol(s)PBB2
Annotation TypeHomolog
Chromosome Positionchr5:16248511-16250451 | Reverse length=274
E-Value2E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.66074066804412
Replicate 20.19001176847329
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.10118046081984
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.099039387723517


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_464044.p1 GENE.R_Transcript_464044~~R_Transcript_464044.p1 ORF type:5prime_partial len:221 (+),score=44.56,Proteasome|PF00227.22|1.2e-37,Pr_beta_C|PF12465.4|5e-06 R_Transcript_464044:3-665(+)
GATACCAGAGCAACAAATGACACCACTGTATGTGATAAAAATTGTGAAAAAATTCACTACATTGCACCAAATATCTTCTGTTGTGGAGCAGGAACTGCAGCAGATACTGAAAACTCAACCTCTTTGATCTCTTCCAAATTGTTGTTGCATAGATTATCTACTGGAAGAAAGAGCAAGGTCGTCACTGCACAAAACTTGTTGGCAAGCATGTTGTGGAGATATCAAGGACACATCTCTGCAGCACTCGTCTTGGGAGGATATGATATTGATGGGCCACATCTCTACTCTATCCATCCTCACGGATCCGTGGATAGCTTGCCATACGTCACCATGGGATCAGGATCTCTTGCAGCTATGGCTATCTTTGAAAATGGCTTCAAAGAACAAATGGAAGAGCAAGATGCTATCGATCTCGTTGAACAAGCTATCACTGCTGGTATCGTCAACGATCTTGGATCTGGTTCTAATGTTGATATCTGTGTCATCACCAAGGAGATGTTCGAGAAGGAGCTCCCTGTCAAGATGCTCCGTAACTACAGAAAGTTGATGCCTCGTAAATACAACAAGCCTGGTGGTTATGAATTCAAAAGAGGTACCACTGCAGTCTTGAAGCAATCTTTCGAGCCTGTAGAAGTTAATGATGGAGAATTGATGGAAATCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_464044.p1 GENE.R_Transcript_464044~~R_Transcript_464044.p1 ORF type:5prime_partial len:221 (+),score=44.56,Proteasome|PF00227.22|1.2e-37,Pr_beta_C|PF12465.4|5e-06 R_Transcript_464044:3-665(+)
DTRATNDTTVCDKNCEKIHYIAPNIFCCGAGTAADTENSTSLISSKLLLHRLSTGRKSKVVTAQNLLASMLWRYQGHISAALVLGGYDIDGPHLYSIHPHGSVDSLPYVTMGSGSLAAMAIFENGFKEQMEEQDAIDLVEQAITAGIVNDLGSGSNVDICVITKEMFEKELPVKMLRNYRKLMPRKYNKPGGYEFKRGTTAVLKQSFEPVEVNDGELMEI*

Click here to download the sequence:
Link to NCBI Protein BLAST