Transcript Information: R_Transcript_464237.p1


Annotated TAIR IDAT5G06860.1
Annotated Gene Namepolygalacturonase inhibiting protein 1
Annotated Gene Symbol(s)PGIP1, ATPGIP1
Annotation TypeHomolog
Chromosome Positionchr5:2132373-2133434 | Forward length=330
E-Value4E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.097871104314846
Replicate 20.05629034964155
Replicate 30.24564866054855
Condition 2: 8 Hour
Replicate 10.45952025370165
Replicate 20.47958995906028
Replicate 30.58396602532076
Condition 3: 24 Hour
Replicate 10.30774540519711
Replicate 20.11825876080738
Replicate 30.058680173423317


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_464237.p1 GENE.R_Transcript_464237~~R_Transcript_464237.p1 ORF type:complete len:373 (-),score=19.73,LRR_8|PF13855.2|5.2e+03,LRR_8|PF13855.2|1.3e+03,LRR_8|PF13855.2|2.3e-07,LRR_8|PF13855.2|6.4,LRR_8|PF13855.2|2e-05,LRR_8|PF13855.2|0.22,LRRNT_2|PF08263.8|2.3e-10,LRRNT_2|PF08263.8|1e+04,LRR_4|PF12799.3|7,LRR_4|PF12799.3|0.076,LRR_4|PF12799.3|0.015,LRR_4|PF12799.3|7.7,LRR_4|PF12799.3|41,LRR_4|PF12799.3|1.9,LRR_1|PF00560.29|6.6e+03,LRR_1|PF00560.29|0.049,LRR_1|PF00560.29|1.8e+02,LRR_1|PF00560.29|4.5e+03,LRR_1|PF00560.29|2.8e+02,LRR_1|PF00560.29|2.2e+03,LRR_1|PF00560.29|4.8e+02,LRR_1|PF00560.29|9.2 R_Transcript_464237:118-1134(-)
ATGGCAACCAAACCAATCAAATCCTTTTATCACCTTATCCCTTTATTTCTCCTCATAATCTCATCTTCGTTATTTTCCCTTTGTCAATCAGCTGAACTTTGCAACCCAAATGACAAAAAAGCCCTTCTCCAATTCAAAAACGAGCTAGGCCCAAATTCTAGCTATTTTTCTTCGTGGCAACCCAACACTGATTGTTGCAAATCTTGGATCAATGTTGGGTGCCATGACCGAACCAACCGCGTTAAAATCCTCACCATCGGTCAGACCAACGAGCTATCCGGTCGAATCCCACCGATTGTAGGAAAATTAACCGGTCTAGAGATGCTCTTGTTCAATGACCTTCCTGGTCTAACCGGTTCCATCCCTTCATCCATCTCTTTGCTCACTAACCTTAATGATCTTGAACTGTTCCGGACCAATTTAACCGGTCCAATCCCAAGTTTTCTTGGCCGGCTCACGAAATTAACCATCCTCGACTTATCCGAAAACCGTCTTTCCGGCCTAATCCCAGTTTCACTTTCAAACCTCCCAAACCTTATCCAGCTCAAGCTCTTCAAGAACCAGCTCACCGGTTCCATCCCCGAGAGCTTCGGCTCGTTCAAGAAGTTATTACTCCTAGAGGCCTACGACAACCAGCTCTCCGGTTCAATTCCTAGGTCATTGAACCAAGCAGGATTCACTTGGTTGGACCTTTCGAGCAACCGGTTCAGCGGGGACGCGTCTTATTTGTTCAAGGGGAAAAAATTGATGTTGATATACTTGAGGAACAATACGTTGTCGTTTGACTTTTCAAATGTGGAGTTTTCTTCTAAATTACAAGCCATTGATGTGAGCCATAATATGATATATGGGTCACTCCCAAAAGAACTGGCTGATTTGAAGTTGAAGGTGTTTAATGTGAGCTCCAACCAGCTTTGTGGATCCATACCCGCTGGAAAGTGGGTCACCCGTTTTGGGGCTGATGCCTTTGCCCATAACAAGTGCCTTTGTGGTGCTCCTTTGACAGCTTGCAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_464237.p1 GENE.R_Transcript_464237~~R_Transcript_464237.p1 ORF type:complete len:373 (-),score=19.73,LRR_8|PF13855.2|5.2e+03,LRR_8|PF13855.2|1.3e+03,LRR_8|PF13855.2|2.3e-07,LRR_8|PF13855.2|6.4,LRR_8|PF13855.2|2e-05,LRR_8|PF13855.2|0.22,LRRNT_2|PF08263.8|2.3e-10,LRRNT_2|PF08263.8|1e+04,LRR_4|PF12799.3|7,LRR_4|PF12799.3|0.076,LRR_4|PF12799.3|0.015,LRR_4|PF12799.3|7.7,LRR_4|PF12799.3|41,LRR_4|PF12799.3|1.9,LRR_1|PF00560.29|6.6e+03,LRR_1|PF00560.29|0.049,LRR_1|PF00560.29|1.8e+02,LRR_1|PF00560.29|4.5e+03,LRR_1|PF00560.29|2.8e+02,LRR_1|PF00560.29|2.2e+03,LRR_1|PF00560.29|4.8e+02,LRR_1|PF00560.29|9.2 R_Transcript_464237:118-1134(-)
MATKPIKSFYHLIPLFLLIISSSLFSLCQSAELCNPNDKKALLQFKNELGPNSSYFSSWQPNTDCCKSWINVGCHDRTNRVKILTIGQTNELSGRIPPIVGKLTGLEMLLFNDLPGLTGSIPSSISLLTNLNDLELFRTNLTGPIPSFLGRLTKLTILDLSENRLSGLIPVSLSNLPNLIQLKLFKNQLTGSIPESFGSFKKLLLLEAYDNQLSGSIPRSLNQAGFTWLDLSSNRFSGDASYLFKGKKLMLIYLRNNTLSFDFSNVEFSSKLQAIDVSHNMIYGSLPKELADLKLKVFNVSSNQLCGSIPAGKWVTRFGADAFAHNKCLCGAPLTACK*

Click here to download the sequence:
Link to NCBI Protein BLAST