Transcript Information: R_Transcript_4643.p1


Annotated TAIR IDAT3G45140.1
Annotated Gene Namelipoxygenase 2
Annotated Gene Symbol(s)LOX2, ATLOX2
Annotation TypeOrtholog
Chromosome Positionchr3:16525437-16529233 | Forward length=896
E-Value7.8E-268
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1186.19457414833
Replicate 2189.83466104736
Replicate 3168.37353973235
Condition 2: 8 Hour
Replicate 1141.22752814061
Replicate 2137.20249743893
Replicate 3175.87052652273
Condition 3: 24 Hour
Replicate 1184.38553836424
Replicate 2160.63869664397
Replicate 3181.43528432387


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4643.p1 GENE.R_Transcript_4643~~R_Transcript_4643.p1 ORF type:5prime_partial len:508 (+),score=98.52,Lipoxygenase|PF00305.15|8.2e-252 R_Transcript_4643:3-1526(+)
GAATTTTCTTGGTTTAGAGATGAAGAGTTTGCTCGTGAGACTCTTGCTGGTCTCAACCCTTACAGTATTAAGTTGGTGACGGAATGGCCCATAAAAAGCAAGTTGGACCCCGAAATTTATGGTCCACAAGAGTCGGCCTTAACCACACAGCTTGTCGAGCATGAGTTGAAGGAGTTCATGTCTGTCGATAAGGCTCTAGAGCAAAAGAAGCTCTTCATGTTGGACTACCATGACTTGTTGCTCCCTTATGTTAACAAAGTAAGAGAGATTGAAGGCACTACACTGTACGGATCAAGGACATTGTTCTTTCTGACACCGGAGGGGACGTTGAACCCACTAGCCATTGAGCTAACAAGGCCACCAACTGAAGATGGTAAGCCCCAGTGGAAGCAAGTATTCACTCCAACTGGGGATTCCACTCAAACTTGGCTTTGGAGGCTTGCTAAAGCTCATGTTTTGGCTCATGATTCTGGTTATCATCAACTTGTTAGCCACTGGCTGAGGACTCACTGTTGCACAGAGCCTTACATAATCGCAACCAACCGGCAACTCAGTGCTCTGCATCCCATTAACAAACTCTTGAACCCTTACTTCCGCTACACCATGCAGATCAATGCTCTCGCTCGAATGTCCTTAATCAACGCAAGTGGGATAATCGAGTTGACATTTTCCCCTCAAAGGTATTCTATGGAGTTAAGCTCCGTCGCTTATGATCAAGATTGGAGGTTTGATCAGCAGGCATTGCCAGCTGATCTAATTAGCAGGGGAATGGCTGTTGAAGATCAAACATCACCACATGGCTTGAAGCTGACAATTGAGGACTATCCTTTTGCCAATGATGGGCTGATCCTTTGGGATGCCATCAAGCAATGGGTGACCGACTACGTCAACCATTACTACCCTGAAGAAGCTCTGGTTCAATCTGATCAAGAACTCCAAGCATGGTGGGGAGAAATCAAGAACGAAGGCCACAAAGACAAAAAAGATGCACCAGGGTGGCCAGCTCTCGAAACTCGCAATGATCTCATTGGAATCCTCGCGACCATCATATGGGTGAGTTCAGGTCACCATGCTGCTGTCAATTTTGGTCAGTACACATATGGAGGGTACTTCCCTAACAGGCCAACTATCGCTCGAATCAAAATGCCTTGCGAAGATCCAACTGAGGAAGAATGGAAAAACTTCATAGCACAACCTCACCATGTGTTACTTGAAACTTTTCCAAACCAAATACAAGCATTAATAGTTATGACTATCTTGAATGTGTTGTCAAGTCACTCACCTGATGAGGAGTACATTGGTGATCAAACTGAGCCATCATGGGCTGATGACCCAAAGATAAAAGAAGCATTTGAGAAGTTCAATGGGAATTTGAAGGAGCTAGAGAAGGTCATAGATCAAAGGAATGCAGATGCCAACTTGAAGAATAGAAATGGAGCTGGGACTGTTCCATATCAGTTGTTGAAGCCTTATTCTAAGTCTGGGGTCACTGGAATGGGGGTGCCAAACAGCATTTCCATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4643.p1 GENE.R_Transcript_4643~~R_Transcript_4643.p1 ORF type:5prime_partial len:508 (+),score=98.52,Lipoxygenase|PF00305.15|8.2e-252 R_Transcript_4643:3-1526(+)
EFSWFRDEEFARETLAGLNPYSIKLVTEWPIKSKLDPEIYGPQESALTTQLVEHELKEFMSVDKALEQKKLFMLDYHDLLLPYVNKVREIEGTTLYGSRTLFFLTPEGTLNPLAIELTRPPTEDGKPQWKQVFTPTGDSTQTWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSALHPINKLLNPYFRYTMQINALARMSLINASGIIELTFSPQRYSMELSSVAYDQDWRFDQQALPADLISRGMAVEDQTSPHGLKLTIEDYPFANDGLILWDAIKQWVTDYVNHYYPEEALVQSDQELQAWWGEIKNEGHKDKKDAPGWPALETRNDLIGILATIIWVSSGHHAAVNFGQYTYGGYFPNRPTIARIKMPCEDPTEEEWKNFIAQPHHVLLETFPNQIQALIVMTILNVLSSHSPDEEYIGDQTEPSWADDPKIKEAFEKFNGNLKELEKVIDQRNADANLKNRNGAGTVPYQLLKPYSKSGVTGMGVPNSISI*

Click here to download the sequence:
Link to NCBI Protein BLAST