Transcript Information: R_Transcript_464436.p1


Annotated TAIR IDAT3G50670.1
Annotated Gene NameU1 small nuclear ribonucleoprotein-70K
Annotated Gene Symbol(s)U1-70K, U1SNRNP
Annotation TypeHomolog
Chromosome Positionchr3:18826476-18829492 | Reverse length=427
E-Value8E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.32594573133426
Replicate 20.29994714880426
Replicate 30.16361955425823
Condition 2: 8 Hour
Replicate 10.2623485530062
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.078768781752062
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_464436.p1 GENE.R_Transcript_464436~~R_Transcript_464436.p1 ORF type:5prime_partial len:280 (+),score=43.41,RRM_1|PF00076.18|2.4e-22,RRM_6|PF14259.2|3.4e-13,RRM_5|PF13893.2|2e-08,U1snRNP70_N|PF12220.4|3e-07,U1snRNP70_N|PF12220.4|5e+03,U1snRNP70_N|PF12220.4|1.6e+04 R_Transcript_464436:2-841(+)
AGAAAAAAACCACTTCCTTTCTCTGGAATTTTGAGTTATGCAACTCTTTTTGAGGACCCAAAATCTGTTGATTATAGTTCATTTGCACCAACTGAAACTCGTGAACAAAGAAAAAAAAGAATAGCTGAAGAAAGAAAAAAAAAGCAAGATGCTCGTATTGAAGAATTACTCGCCACATACGATCCAAAAGCTGAAAATGAAACCTTCACTTCAGACCCATATAAAACTTTATTTGTATCAAGAATTAGTTATGAAACAACAGAGCAAAAATTAAAACGAGAATTTGAAATATATGGTCCAATCAAACAAGTCAAACTTGTAGTAGATAAAAATACTGGAAAGAGCAGGGGTTATGCATTCATTGAATATGAAAGAGAAAGAGATATGAAAAGAGCCTACAAAGAGGCAGATGGGAAAAAAATTGATGGACGAAGAGTGTTAGTTGATACTGAAAAAGGTAGAACTACACCAGGTTGGAGACCTCGCAGATTGGGAGGAGGACTTGGTGCCACCCGACTTGGAGGAGATGACGTTAATCAAAAATATTCTGGAAGATCACCACCTTCAACGAGAGAACGAGAACGTGAACGCGAACGCGATAGAGATGGTAGAGGAGGAAATAGAGATAGTTATAAGCCCAAAGACTCACATAGAAGCTCAAGAGATAGCTACCGTGGGCCACCACGAGATTCATATCGTAGCTCTAGAGATAATTATCGAAATGACAGAGAGCGAGATCGAGAAAGAGATCGAGAAAGGGACAGAGATCGAGAACGAGATCGAGAAAGAGAGCGCGACCGACCAAGAGACTTGCACAGAGGTGATAGAGGTGATAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_464436.p1 GENE.R_Transcript_464436~~R_Transcript_464436.p1 ORF type:5prime_partial len:280 (+),score=43.41,RRM_1|PF00076.18|2.4e-22,RRM_6|PF14259.2|3.4e-13,RRM_5|PF13893.2|2e-08,U1snRNP70_N|PF12220.4|3e-07,U1snRNP70_N|PF12220.4|5e+03,U1snRNP70_N|PF12220.4|1.6e+04 R_Transcript_464436:2-841(+)
RKKPLPFSGILSYATLFEDPKSVDYSSFAPTETREQRKKRIAEERKKKQDARIEELLATYDPKAENETFTSDPYKTLFVSRISYETTEQKLKREFEIYGPIKQVKLVVDKNTGKSRGYAFIEYERERDMKRAYKEADGKKIDGRRVLVDTEKGRTTPGWRPRRLGGGLGATRLGGDDVNQKYSGRSPPSTRERERERERDRDGRGGNRDSYKPKDSHRSSRDSYRGPPRDSYRSSRDNYRNDRERDRERDRERDRDRERDRERERDRPRDLHRGDRGDR*

Click here to download the sequence:
Link to NCBI Protein BLAST