Transcript Information: R_Transcript_464541.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value2E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.064270989277179
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.16167469878665
Replicate 20
Replicate 30.15413876540068


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_464541.p1 GENE.R_Transcript_464541~~R_Transcript_464541.p1 ORF type:internal len:284 (+),score=46.81,RVT_1|PF00078.23|8.2e-18 R_Transcript_464541:2-850(+)
TTCCATGCAATGAACAATAAAAGACCTGGTCGATGGGCTTCCTCTGCTCTTAAGCTGGCTATGTGTAAGGCCTATGCTAGCGCTGAGTGGTGTTTCTTGGACCAAATGATGAGAAAACTTGGCTTTAGTAATGGCTGGTGTCAGAGAATCATGCAGTGTCTTAGCACAGTTTCTTACTCTTTCCTCATCAATGGAAAAGCTTATGGTAGGATTTCCCCTTCACGAGGACTTCGTCAAGGTGATCCAATATCCCCTTACCTGTTTATTTTGTGCGCTGATGCTCTTTCCCTTATGCTCACTAATGCTGTTAATAATGGAGATATTCATGGTGCGAAAGTTTGTCGGGTTGCCCCCCCGGTGTCCCATTTATTTTTTGCCGATGATAGCATTTTCTTTGCAAGGGCTAATATTCAAGAGTGCAAATGCATTGCTGATTTGATTCGTAAATATGAGGCTGCCTCAGGACAAAAGGTGAACTTCGACAAATCGGAGGTGACCTTTGGGAAGAATGTTCCCCAGGGAATAAGAGCTGCAATCATTAATGAACTTGGTGTGAGGGAGGTGGACAAGCATGAGAAGTATCTGGGACTTCCCACAATTATTGGTCGTTCCAAGAGGGCAATCTTTAGCGGAGTGAAGGAAAGAGTTTGGAAAAAGCTTCAAGGTTGGAAAGAGAAACTCCTTTCAAAGTCGGGAAAGGAAATCCTTATTAAAGCGGTTGCCCAAGCGATCCCCACCTATATCATGAGCATCTTCAAACTCCCAGATGGTTTATGTGATGATATTAATTCGTTACTAGCTAGATTTTGGTGGGGTGGATCTGATGAGAAGAGGAAAATTCGTTGGAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_464541.p1 GENE.R_Transcript_464541~~R_Transcript_464541.p1 ORF type:internal len:284 (+),score=46.81,RVT_1|PF00078.23|8.2e-18 R_Transcript_464541:2-850(+)
FHAMNNKRPGRWASSALKLAMCKAYASAEWCFLDQMMRKLGFSNGWCQRIMQCLSTVSYSFLINGKAYGRISPSRGLRQGDPISPYLFILCADALSLMLTNAVNNGDIHGAKVCRVAPPVSHLFFADDSIFFARANIQECKCIADLIRKYEAASGQKVNFDKSEVTFGKNVPQGIRAAIINELGVREVDKHEKYLGLPTIIGRSKRAIFSGVKERVWKKLQGWKEKLLSKSGKEILIKAVAQAIPTYIMSIFKLPDGLCDDINSLLARFWWGGSDEKRKIRWR

Click here to download the sequence:
Link to NCBI Protein BLAST