Transcript Information: R_Transcript_4647.p1


Annotated TAIR IDAT3G45140.1
Annotated Gene Namelipoxygenase 2
Annotated Gene Symbol(s)LOX2, ATLOX2
Annotation TypeOrtholog
Chromosome Positionchr3:16525437-16529233 | Forward length=896
E-Value1.5E-245
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.447779245396
Replicate 240.166835579005
Replicate 338.50987769788
Condition 2: 8 Hour
Replicate 156.373254288482
Replicate 268.980774209869
Replicate 376.702768687805
Condition 3: 24 Hour
Replicate 164.880759556555
Replicate 247.124279865581
Replicate 365.572481743148


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4647.p1 GENE.R_Transcript_4647~~R_Transcript_4647.p1 ORF type:complete len:483 (+),score=55.04,Lipoxygenase|PF00305.15|2.5e-235 R_Transcript_4647:74-1522(+)
ATGTGGGAATGGCCAATAAAGAGCAAGCTGGACCCCAAAATTTATGGTCCAGAAGAATCAGCCTTCACCATACAGCTAATTGAGCACGAGTTGAAAGACTTCACGTCTATTAATAAGGATCTAGAACAAAAGAAGCTATTCATATTGGACTACCATGACTTGCTGCTCCCTTATGTGAACAAAGTAAGAGAGATCAAAGGCACCACGCTCTACGGATCAAGGACATTGTTCTTTCTGAAGCCAGAGGGGACATTGACACCGCTCGCCATTGAGCTAACAAGGCCGCCAACGGAAGACGGTAAGCCCCAGTGGAAGCAAGTGTTCACTCCAACTGGGGATGCCACTCAGACTTGGCTTTGGAGGCTCGCTAAAGCTCATGTGTTGGCTCATGATTCTGGTTATCACCAACTAATTAGCCACTGGCTGAGAACTCACTGTTGCACAGAGCCTTACATAATTGCAACCAATCGACAACTCAGTGCTATGCATCCCATTAACAAACTCTTGAAACCTTACTTCCGTTACACCATGGAGATCAATGCTCTGGCTCGAAAATCATTAATCAATGCAAATGGGATCATTGAGACCACATTTTCCACTGAAAAGTATTCAATGGAGTTAAGCTCCGTTGCTTATGATCAAGATTGGAGGTTTGATCAGCAGGCATTACCCGCTGATCTAATTAGCAGGGGAATGGCGGTTGAAGATCCAACTTCACCACATGGTTTTAAGCTAACAATTGAGGACTATCCTTTTGCCAATGATGGGTTAATCCTTTGGGATGCCATCAAGCAATGGGTGACCGAATACGTTAGCCATTACTACCCTGAAGAAGCTCTGATTCAATCCGATCAAGAGCTCCAAGCATGGTGGGAAGAAATCAAGAACGAAGGTCACAAAGACAAGAAAGACGCACCAGGGTGGCCATCCCTCGAAACCCCTGAAGACCTCATTGCAATCATTTCGACTATCATATGGGTAAGTTCCGGTCACCATGCTGCTGTCAATTTCGGTCAGTACACATATGCAGGGTACTTCCCCAACAGGCCAACTATCGCCCGAATCAAAATGCCTTCCGAAGAACCAACGGAAGAAGAATGGAACAACTTCATACAACAACCCCACAATGTGTTGCTAGAAACTTTCCCAACCCAAATTCAGGCATTCAAAGTCATGGCCGTCTTGAGTGTGCTGTCGACTCACTCACCTGACGAGGAGTACATTGGCGATCAAATTGAACCGTCTTGGGCTAATGATCCCAAGATAAAGGAAGCATTCGAGAGATTCAACGAGAAGTTGAAGGAGCTAGAAAAGACGATAGATCAGAGGAACGCGGATGTCAAGTTGAAGAATAGAAATGGAGCCGGGACTATGCCTTATCAATTACTGAAGCCATTTTCGAAATCAGGAGTGACGGGAATGGGGGTGCCCAACAGCATTTCCATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4647.p1 GENE.R_Transcript_4647~~R_Transcript_4647.p1 ORF type:complete len:483 (+),score=55.04,Lipoxygenase|PF00305.15|2.5e-235 R_Transcript_4647:74-1522(+)
MWEWPIKSKLDPKIYGPEESAFTIQLIEHELKDFTSINKDLEQKKLFILDYHDLLLPYVNKVREIKGTTLYGSRTLFFLKPEGTLTPLAIELTRPPTEDGKPQWKQVFTPTGDATQTWLWRLAKAHVLAHDSGYHQLISHWLRTHCCTEPYIIATNRQLSAMHPINKLLKPYFRYTMEINALARKSLINANGIIETTFSTEKYSMELSSVAYDQDWRFDQQALPADLISRGMAVEDPTSPHGFKLTIEDYPFANDGLILWDAIKQWVTEYVSHYYPEEALIQSDQELQAWWEEIKNEGHKDKKDAPGWPSLETPEDLIAIISTIIWVSSGHHAAVNFGQYTYAGYFPNRPTIARIKMPSEEPTEEEWNNFIQQPHNVLLETFPTQIQAFKVMAVLSVLSTHSPDEEYIGDQIEPSWANDPKIKEAFERFNEKLKELEKTIDQRNADVKLKNRNGAGTMPYQLLKPFSKSGVTGMGVPNSISI*

Click here to download the sequence:
Link to NCBI Protein BLAST