Transcript Information: R_Transcript_464800.p2


Annotated TAIR IDAT1G09690.1
Annotated Gene NameTranslation protein SH3-like family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:3136407-3137430 | Reverse length=164
E-Value3E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22534519697184
Replicate 20
Replicate 30.14139961479106
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.56685943772109
Replicate 20
Replicate 30.40532786457217


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_464800.p2 GENE.R_Transcript_464800~~R_Transcript_464800.p2 ORF type:5prime_partial len:162 (+),score=21.53,Ribosomal_L21e|PF01157.14|1.2e-36,Ribosomal_L21e|PF01157.14|5.6e+03 R_Transcript_464800:3-488(+)
AAAATGCCTCACAGCTTCGGTTACCGTGCTGCCACCCGCACCCTTTTCAAGAAGGCGTTCAAGACCAACGGCAGATGCCACACCACCACCTACCTGAGAAACTTCAAGAGAGGTGACTATGTTGATATCAAGGTGGACTCCTCCATCCACAAGGGTATGCCCTTCAAGCACTACCACGGCAGAACCGGCGTGGTGTTCAACGTGAACAAGAGAGCTGTGGGTGTCATTATCAACAAGGAAGTGAACGGCCGCATCCTGCGCAAGCAGCTGCACATTGCCACTCCCCACCTGCACCCCTCTACTTGCCAGAAGCAGATCATCTCTCGCAAGCAGAGCAACGAGGCCCACAAGAAGGCCGTCCGGGAAGGCAAGGCTGAGAAGACCTCTCTGAAGAGAGAGAACACTCAGCCCAAGAAGGGTTACTTCTACACTGTGGAGAGCACCCCCGAGACCATTCAGCCCCTGCCTTATGTTGACCTTGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_464800.p2 GENE.R_Transcript_464800~~R_Transcript_464800.p2 ORF type:5prime_partial len:162 (+),score=21.53,Ribosomal_L21e|PF01157.14|1.2e-36,Ribosomal_L21e|PF01157.14|5.6e+03 R_Transcript_464800:3-488(+)
KMPHSFGYRAATRTLFKKAFKTNGRCHTTTYLRNFKRGDYVDIKVDSSIHKGMPFKHYHGRTGVVFNVNKRAVGVIINKEVNGRILRKQLHIATPHLHPSTCQKQIISRKQSNEAHKKAVREGKAEKTSLKRENTQPKKGYFYTVESTPETIQPLPYVDLV*

Click here to download the sequence:
Link to NCBI Protein BLAST