Transcript Information: R_Transcript_46497.p3


Annotated TAIR IDAT3G28760.2
Annotated Gene NameCONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase, prokaryotic-type (InterPro:IPR002812); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:10793126-10795304 | Reverse length=444
E-Value1.1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.99047074948086
Replicate 20.16276201873099
Replicate 30.355143218545
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.28142031969592
Condition 3: 24 Hour
Replicate 11.6017074810026
Replicate 20
Replicate 30.84836064677897


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_46497.p3 GENE.R_Transcript_46497~~R_Transcript_46497.p3 ORF type:complete len:129 (+),score=22.81 R_Transcript_46497:216-602(+)
ATGGCTTTCTCATTGTGTGCTTCGTCCACCGAAATTATAAGGCCTCATTCCTCACATTCACTGCTTAAACCCCAATCTGGGAAATGGAAAAATTGCAGATTGAAAACTGGCAAGGGCCTTTCTCTATCAACTGGAATCAAACCCAGAAACTGTAAACCAAGTAAAAGCAGATTGCAAAAATACAATTGTTGTTTAAAAATGGAATCTTTGAAGACAAATGGGGAGCCCAAGTTGGTGTGGATTTGGACAGAGAATAAGCAAGTCATGACAGCTGCAGTTGAGAGAGGATGGAATACCTTCATCTTTGACTCTAATTCTGCTGAACTTGCAAAGGATTGGTCTTGTGATACCTGCAGAAAATATCGTTGCTGCTTCCCAAGGCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_46497.p3 GENE.R_Transcript_46497~~R_Transcript_46497.p3 ORF type:complete len:129 (+),score=22.81 R_Transcript_46497:216-602(+)
MAFSLCASSTEIIRPHSSHSLLKPQSGKWKNCRLKTGKGLSLSTGIKPRNCKPSKSRLQKYNCCLKMESLKTNGEPKLVWIWTENKQVMTAAVERGWNTFIFDSNSAELAKDWSCDTCRKYRCCFPRQ*

Click here to download the sequence:
Link to NCBI Protein BLAST