Transcript Information: R_Transcript_46498.p1


Annotated TAIR IDAT3G28760.2
Annotated Gene NameCONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase, prokaryotic-type (InterPro:IPR002812); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:10793126-10795304 | Reverse length=444
E-Value2.6E-165
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.1478539679387
Replicate 27.1298912420684
Replicate 37.8322803021973
Condition 2: 8 Hour
Replicate 16.5945537914126
Replicate 27.9598455266047
Replicate 38.3318868421448
Condition 3: 24 Hour
Replicate 111.882143787641
Replicate 28.5741755874375
Replicate 39.2779263426895


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_46498.p1 GENE.R_Transcript_46498~~R_Transcript_46498.p1 ORF type:complete len:427 (+),score=84.38,DHQS|PF01959.12|1.2e-122 R_Transcript_46498:216-1496(+)
ATGGCTTTCTCATTGTGTGCTTCGTCCACCGAAATTATAAGGCCTCATTCCTCACATTCACTGCTTAAACCCCAATCTGGGAAATGGAAAAATTGCAGATTGAAAACTGGCAAGGGCCTTTCTCTATCAACTGGAATCAAACCCAGAAACTGTAAACCAAGTAAAAGCAGATTGCAAAAATACAATTGTTGTTTAAAAATGGAATCTTTGAAGACAAATGGGGAGCCCAAGTTGGTGTGGATTTGGACAGAGAATAAGCAAGTCATGACAGCTGCAGTTGAGAGAGGATGGAATACCTTCATCTTTGACTCTAATTCTGCTGAACTTGCAAAGGATTGGTTTTCAATGGCATTGATTAATCCTTTATACGTCAAAGATGGGTTACTTACGGATTCTGAAAGTAGAAGTGTAGCCTCACTCATTGATATTTCGTCTCCAAAAGATTTAGACAAGATGCTTCTCATGGATGATTTGGACAACATTGTCATTCGTTTTCTAGATTGGCAGGTGATACCTGCAGAAAATATCGTTGCTGCTTCCCAAGGCAATAACAAGAGGGTGTTTGCTATTTCTGAATCTGCTTTGGAGGCCCAAAGTTTCCTAGAGGCTCTGGAGCATGGTCTTGGTGGGGTCATCTTGAAAGTTGAGGAAATTGATGTTGTTCTCCAACTGAAGGAATATTTTGATAGAAGGAATGAAACAAGAAATCGCCTGACTTTAACAAAAGCAACTATAGATCGAGTGTGCATGGCTGGAATGGGGGATCGTGTTTGTGTAGATTTATGTAGCCTGATGAGATTCGGAGAGGGACTTCTGGTTGGATCCTTTGCTCGGGGCCTTTTTCTTGTTCACTCTGAGTGCCTGGAGACTGATTACATAGCGAGTCGACCCTTTCGAGTAAATGCGGGACCAGTACATTCTTATGTAGCTGTCCCAGGTGGAAAGACTTGCTACCTCTCTGAACTAAAAGCAGGGAAAGAAGTGATTGTGGTTGACCAGAGTGGGCAGCAAAGAACTGCAATTGTTGGCCGTGTTAAGATAGAAACTCGGCCGATGGTACTTGTAGAGGCTAAGGGCAATTCATCTGATCAAAGCTTTTACAGTATACTTCTGCAGAATGCAGAAACAGTTGCCTTGATTGCTCCAACTGAAGGACATGGATCTCACAGCACGGCAATTCCTGTGACTTCTTTGAAAGTTGGTGACGAGGTTTTGCTAAGAGTCCAGGGCGGGGCTCGACACACTGGAATAGAGATTCAAGAATTTATTGTTGAAAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_46498.p1 GENE.R_Transcript_46498~~R_Transcript_46498.p1 ORF type:complete len:427 (+),score=84.38,DHQS|PF01959.12|1.2e-122 R_Transcript_46498:216-1496(+)
MAFSLCASSTEIIRPHSSHSLLKPQSGKWKNCRLKTGKGLSLSTGIKPRNCKPSKSRLQKYNCCLKMESLKTNGEPKLVWIWTENKQVMTAAVERGWNTFIFDSNSAELAKDWFSMALINPLYVKDGLLTDSESRSVASLIDISSPKDLDKMLLMDDLDNIVIRFLDWQVIPAENIVAASQGNNKRVFAISESALEAQSFLEALEHGLGGVILKVEEIDVVLQLKEYFDRRNETRNRLTLTKATIDRVCMAGMGDRVCVDLCSLMRFGEGLLVGSFARGLFLVHSECLETDYIASRPFRVNAGPVHSYVAVPGGKTCYLSELKAGKEVIVVDQSGQQRTAIVGRVKIETRPMVLVEAKGNSSDQSFYSILLQNAETVALIAPTEGHGSHSTAIPVTSLKVGDEVLLRVQGGARHTGIEIQEFIVEK*

Click here to download the sequence:
Link to NCBI Protein BLAST