Transcript Information: R_Transcript_464996.p1


Annotated TAIR IDAT1G08880.1
Annotated Gene NameHistone superfamily protein
Annotated Gene Symbol(s)HTA5, H2AXA, G-H2AX, GAMMA-H2AX
Annotation TypeOrtholog
Chromosome Positionchr1:2847144-2847676 | Reverse length=142
E-Value1.7E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.25118753607411
Replicate 20.77050643729534
Replicate 30.84061422371202
Condition 2: 8 Hour
Replicate 10.22464096281876
Replicate 20.1025728524825
Replicate 30.083264268900858
Condition 3: 24 Hour
Replicate 10.21062208465784
Replicate 20.1011709123421
Replicate 30.20080463015502


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_464996.p1 GENE.R_Transcript_464996~~R_Transcript_464996.p1 ORF type:complete len:218 (+),score=49.78,Histone_H2A_C|PF16211.1|2.5e-18,Histone_H2A_C|PF16211.1|1.6e+04,Histone_H2A_C|PF16211.1|1.6e+04,Histone|PF00125.20|1.3e-14,Histone|PF00125.20|1.6e+04 R_Transcript_464996:26-655(+)
ATGTCAGGTAAAGGTAAAGGTGGTCGTGGTAAGAAAGCTGGTGCTAAAGCTACTTCACGCTCTGTTCGTGCTGGTTTACAATTCCCTGTTGGTCGTATCTCACGTTTCTTACGCAAGGGTCGTTATGCAGCTCGTATTGGTGCAGGTGCCCCAGTATATATGGCAGCTGTATTAGAATATTTAGCAGCTGAAATCTTAGAATTAGCCGGTAACGCTGCACGTGATAATAAACGTACTCGTATTATTCCTCGTCATGTACAATTAGCTGTACGTAATGATGAAGAATTAAACAAATTATTAGGTGGTATTACTATCGCACAAGGTGGTGTATTACCAAATATTCAAGGTGTGTTATTACCAAAGAAGAAGGCTGGTGATAAAGAAAAACCAGAAAAAGAAAAGAGCGAGAAGAAAAAGAAGGTAAAGACTAACACATCAAAGAAAGCATCGAAATCTGGTGAAACTAAACCAAAGAAGGAAAAGAAATCAGGATCAAAGAAAGGTTCAAAGAAAGGAAGTAAGAAAGGATCGAAGAAATCTGGTTCAAAGAAATCATCAGGTTCCAAGAAAGGCTCAAAGAAGGCTGATAAGAAGGCCGATACCGAAGCTGCCAAGACTGCCTCTGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_464996.p1 GENE.R_Transcript_464996~~R_Transcript_464996.p1 ORF type:complete len:218 (+),score=49.78,Histone_H2A_C|PF16211.1|2.5e-18,Histone_H2A_C|PF16211.1|1.6e+04,Histone_H2A_C|PF16211.1|1.6e+04,Histone|PF00125.20|1.3e-14,Histone|PF00125.20|1.6e+04 R_Transcript_464996:26-655(+)
MSGKGKGGRGKKAGAKATSRSVRAGLQFPVGRISRFLRKGRYAARIGAGAPVYMAAVLEYLAAEILELAGNAARDNKRTRIIPRHVQLAVRNDEELNKLLGGITIAQGGVLPNIQGVLLPKKKAGDKEKPEKEKSEKKKKVKTNTSKKASKSGETKPKKEKKSGSKKGSKKGSKKGSKKSGSKKSSGSKKGSKKADKKADTEAAKTASE*

Click here to download the sequence:
Link to NCBI Protein BLAST