Transcript Information: R_Transcript_4650.p1


Annotated TAIR IDAT5G26040.2
Annotated Gene Namehistone deacetylase 2
Annotated Gene Symbol(s)HDA2
Annotation TypeOrtholog
Chromosome Positionchr5:9099321-9101598 | Reverse length=387
E-Value2.9E-190
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.195856864668
Replicate 27.6294696280153
Replicate 310.121581728532
Condition 2: 8 Hour
Replicate 16.3350057567001
Replicate 28.7753460713955
Replicate 312.400082836602
Condition 3: 24 Hour
Replicate 110.678049873351
Replicate 27.5654667124655
Replicate 311.580122828533


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4650.p1 GENE.R_Transcript_4650~~R_Transcript_4650.p1 ORF type:5prime_partial len:344 (+),score=74.92,Hist_deacetyl|PF00850.15|1.4e-47 R_Transcript_4650:2-1033(+)
CGTATTCTCTCCAGTAATCTCTACTTCGATGTTCCTCTTTCTAAGGCACCGCTGATTTATTCGTCGTCTTATAATATTGCGTTCATGGGAATTGAGAAATTGCATCCATTTGATTCTTCAAAATGGGGTCGCATATGTCTGTTCCTTTCCTCGGAGGGTGTATTGGACAAAAAGCGTATTGTTGAGCCTAAGGAAGCTTCAAGAGATGATCTGTTAGTGGTGCATCTAGAGAAATACTTGGATAGTCTGAAAAACAGTTTGACCGTGGCCACTATTGTGGAGGTGCCACCAGTTGCAATGTTGCCCAATTGCATCGTACAGCAAAAAGTTCTTTACCCTTTCAGAAAGCAGGTTGGGGGATCTATTCTAGCTGCAAAGCTTGCGAAGGAGCGAGGATGGGCAATCAATGTTGGTGGAGGTTTCCATCATTGTTCTGCTAATAAGGGAGGTGGTTTTTGTGCTTATGCTGACATCTCCCTGTGCATTCACTTTGCCTTTATTCGTTTAAATATTTCCAGGGTTATGATTATTGATCTTGATGCACATCAAGGAAATGGTCATGAAACAGATTTTGCTGGAGAAAGAAGAGTGTACATTCTTGATATATACAACCCTAACATATATCCATTTGACTATACAGCAAGGAGGTACATTGATCAGAAGGTTGAAGTTGAGAGTGGAACATCAACAAATGAGTACTTGCAGAAGTTAGATGATGCACTTGAGGTTGCAGGGCGTATGTTTCATCCTGAGTTGGTGGTGTACAATGCTGGTACGGACATTCTGGATGGCGATCCACTTGGTAGGCTGAGGGTTAGCCCTGATGGTATAATTAAGAGAGATGAGAAGGTTTTTGCATTTGCTCGCGAGAAGAACATTCCTCTTCTGATGCTTACATCAGGTGGCTATATGAAGACGAGTGCTAGAGTGATTGCTGATTCGATAACAAATCTGGCAAAGAAACAGTTGATAGATTTGACAGGCTTGGAAAATACTGCAGCAACAGGGAATTCGAGATGCAATGCCCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4650.p1 GENE.R_Transcript_4650~~R_Transcript_4650.p1 ORF type:5prime_partial len:344 (+),score=74.92,Hist_deacetyl|PF00850.15|1.4e-47 R_Transcript_4650:2-1033(+)
RILSSNLYFDVPLSKAPLIYSSSYNIAFMGIEKLHPFDSSKWGRICLFLSSEGVLDKKRIVEPKEASRDDLLVVHLEKYLDSLKNSLTVATIVEVPPVAMLPNCIVQQKVLYPFRKQVGGSILAAKLAKERGWAINVGGGFHHCSANKGGGFCAYADISLCIHFAFIRLNISRVMIIDLDAHQGNGHETDFAGERRVYILDIYNPNIYPFDYTARRYIDQKVEVESGTSTNEYLQKLDDALEVAGRMFHPELVVYNAGTDILDGDPLGRLRVSPDGIIKRDEKVFAFAREKNIPLLMLTSGGYMKTSARVIADSITNLAKKQLIDLTGLENTAATGNSRCNAL*

Click here to download the sequence:
Link to NCBI Protein BLAST