Transcript Information: R_Transcript_46506.p1


Annotated TAIR IDAT3G28760.2
Annotated Gene NameCONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase, prokaryotic-type (InterPro:IPR002812); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:10793126-10795304 | Reverse length=444
E-Value1E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3166070196846
Replicate 21.7210082308441
Replicate 31.0514568076922
Condition 2: 8 Hour
Replicate 10.64225219533758
Replicate 20.43988620015447
Replicate 30.53562129699503
Condition 3: 24 Hour
Replicate 10.97852948839395
Replicate 21.3016218361652
Replicate 30.78939262805204


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_46506.p1 GENE.R_Transcript_46506~~R_Transcript_46506.p1 ORF type:complete len:305 (+),score=49.29,DHQS|PF01959.12|3e-46 R_Transcript_46506:345-1259(+)
ATGCACAACTTCATTAGTACTGTTCTCATTATTTTATTGACAACCCACATTTGTCAATTAATCGTAGGGAAATGGAAAAATTGCAGATTGAAAACTGGCAAGGGCCTTTCTCTATCAACTGGAATCAAACCCAGAAACTGTAAACCAAGTAAAAGCAGATTGCAAAAATACAATTGTTGTTTAAAAATGGAATCTTTGAAGACAAATGGGGAGCCCAAGTTGGTGTGGATTTGGACAGAGAATAAGCAAGTCATGACAGCTGCAGTTGAGAGAGGATGGAATACCTTCATCTTTGACTCTAATTCTGCTGAACTTGCAAAGGATTGGTTTTCAATGGCATTGATTAATCCTTTATACGTCAAAGATGGGTTACTTACGGATTCTGAAAGTAGAAGTGTAGCCTCACTCATTGATATTTCGTCTCCAAAAGATTTAGACAAGATGCTTCTCATGGATGATTTGGACAACATTGTCATTCGTTTTCTAGATTGGCAGGTGATACCTGCAGAAAATATCGTTGCTGCTTCCCAAGGCAATAACAAGAGGGTGTTTGCTATTTCTGAATCTGCTTTGGAGGCCCAAAGTTTCCTAGAGGCTCTGGAGCATGGTCTTGGTGGGGTCATCTTGAAAGTTGAGGAAATTGATGTTGTTCTCCAACTGAAGGAATATTTTGATAGAAGGAATGAAACAAGAAATCGCCTGACTTTAACAAAAGCAACTATAGATCGAGTGTGCATGGCTGGAATGGGGGATCGTGTTTGTGTAGATTTATGTAGCCTGATGAGATTCGGAGAGGGACTTCTGGTTTATTTCTTTTCTCTTCTGCTGCCATCCTCCCTTGAACTGTTCCTTTCTTGTTTCCTTATGTCCATCTTTTGTTATGTGTTCATATTTGTTACTAGAATTTTTTGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_46506.p1 GENE.R_Transcript_46506~~R_Transcript_46506.p1 ORF type:complete len:305 (+),score=49.29,DHQS|PF01959.12|3e-46 R_Transcript_46506:345-1259(+)
MHNFISTVLIILLTTHICQLIVGKWKNCRLKTGKGLSLSTGIKPRNCKPSKSRLQKYNCCLKMESLKTNGEPKLVWIWTENKQVMTAAVERGWNTFIFDSNSAELAKDWFSMALINPLYVKDGLLTDSESRSVASLIDISSPKDLDKMLLMDDLDNIVIRFLDWQVIPAENIVAASQGNNKRVFAISESALEAQSFLEALEHGLGGVILKVEEIDVVLQLKEYFDRRNETRNRLTLTKATIDRVCMAGMGDRVCVDLCSLMRFGEGLLVYFFSLLLPSSLELFLSCFLMSIFCYVFIFVTRIFC*

Click here to download the sequence:
Link to NCBI Protein BLAST