Transcript Information: R_Transcript_4651.p1


Annotated TAIR IDAT5G26040.2
Annotated Gene Namehistone deacetylase 2
Annotated Gene Symbol(s)HDA2
Annotation TypeOrtholog
Chromosome Positionchr5:9099321-9101598 | Reverse length=387
E-Value4E-179
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4599677836548
Replicate 23.5654095046544
Replicate 32.5932155769229
Condition 2: 8 Hour
Replicate 15.2139712421358
Replicate 26.3285514644865
Replicate 38.6110066554936
Condition 3: 24 Hour
Replicate 15.1361132072761
Replicate 23.9235770533102
Replicate 34.0117625841213


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4651.p1 GENE.R_Transcript_4651~~R_Transcript_4651.p1 ORF type:5prime_partial len:371 (+),score=70.66,Hist_deacetyl|PF00850.15|8.6e-47 R_Transcript_4651:2-1114(+)
CGTATTCTCTCCAGTAATCTCTACTTCGATGTTCCTCTTTCTAAGGCACCGCTGATTTATTCGTCGTCTTATAATATTGCGTTCATGGGAATTGAGAAATTGCATCCATTTGATTCTTCAAAATGGGGTCGCATATGTCTGTTCCTTTCCTCGGAGGGTGTATTGGACAAAAAGCGTATTGTTGAGCCTAAGGAAGCTTCAAGAGATGATCTGTTAGTGGTGCATCTAGAGAAATACTTGGATAGTCTGAAAAACAGTTTGACCGTGGCCACTATTGTGGAGGTGCCACCAGTTGCAATGTTGCCCAATTGCATCGTACAGCAAAAAGTTCTTTACCCTTTCAGAAAGCAGGTTGGGGGATCTATTCTAGCTGCAAAGCTTGCGAAGGAGCGAGGATGGGCAATCAATGTTGGTGGAGGTTTCCATCATTGTTCTGCTAATAAGGGAGGTGGTTTTTGTGCTTATGCTGACATCTCCCTGTGCATTCACTTTGCCTTTATTCGTTTAAATATTTCCAGGGTTATGATTATTGATCTTGATGCACATCAAGGAAATGGTCATGAAACAGATTTTGCTGGAGAAAGAAGAGTGTACATTCTTGATATATACAACCCTAACATATATCCATTTGACTATACAGCAAGGAGGTACATTGATCAGAAGGTTGAAGTTGAGGTAAGCCTTCGACTAAGAGAAGAAAAAGTAATGTATTCTTTTTTTGGCTTTTGTGGAGCAATCGTTTTATTGTTTCTTCAGAGTGGAACATCAACAAATGAGTACTTGCAGAAGTTAGATGATGCACTTGAGGTTGCAGGGCGTATGTTTCATCCTGAGTTGGTGGTGTACAATGCTGGTACGGACATTCTGGATGGCGATCCACTTGGTAGGCTGAGGGTTAGCCCTGATGGTATAATTAAGAGAGATGAGAAGGTTTTTGCATTTGCTCGCGAGAAGAACATTCCTCTTCTGATGCTTACATCAGGTGGCTATATGAAGACGAGTGCTAGAGTGATCGCTGATTCGATCACTAATCTGGTAAAGAAACAGTTGATAGATTTGACAGGCTTGGAAAATACTGCAGCAACAGGGAGTTTGAAATGCAATGCCCTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4651.p1 GENE.R_Transcript_4651~~R_Transcript_4651.p1 ORF type:5prime_partial len:371 (+),score=70.66,Hist_deacetyl|PF00850.15|8.6e-47 R_Transcript_4651:2-1114(+)
RILSSNLYFDVPLSKAPLIYSSSYNIAFMGIEKLHPFDSSKWGRICLFLSSEGVLDKKRIVEPKEASRDDLLVVHLEKYLDSLKNSLTVATIVEVPPVAMLPNCIVQQKVLYPFRKQVGGSILAAKLAKERGWAINVGGGFHHCSANKGGGFCAYADISLCIHFAFIRLNISRVMIIDLDAHQGNGHETDFAGERRVYILDIYNPNIYPFDYTARRYIDQKVEVEVSLRLREEKVMYSFFGFCGAIVLLFLQSGTSTNEYLQKLDDALEVAGRMFHPELVVYNAGTDILDGDPLGRLRVSPDGIIKRDEKVFAFAREKNIPLLMLTSGGYMKTSARVIADSITNLVKKQLIDLTGLENTAATGSLKCNAL*

Click here to download the sequence:
Link to NCBI Protein BLAST