Transcript Information: R_Transcript_465121.p3


Annotated TAIR IDAT3G48990.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18159031-18161294 | Reverse length=514
E-Value1.2E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.13633961309285
Replicate 30.14874504932567
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.14907667030977
Replicate 20.14321596682193
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_465121.p3 GENE.R_Transcript_465121~~R_Transcript_465121.p3 ORF type:internal len:154 (+),score=-6.28,AMP-binding|PF00501.24|1.7e-28,AMP-binding_C|PF13193.2|8.2e-09 R_Transcript_465121:3-461(+)
GAGGACGGGGCGAGGAAGGCCGGGTCGGTGGGGCGCGCGGTGGGTCAGGAGATGGCGATCCTGGACGAGGAAGGGCGGCGGGTGGAGGCCGGGAAGAGCGGCGAGGTGTGCGTGCGCGGCGCCAACGTGACGAGCGGGTACAAGGGGAACCCGGAGGCGAACGAGGCGGCGTTCCGGTTCGGGTGGTTCCACACCGGCGACATCGGCGTCGTGGACGAGGAGGGGTACCTGCGGCTGGTGGGGCGGATCAAGGAGCTGATCAACCGCGGCGGCGAGAAGATATCGCCGATCGAGGTGGACTCGGTGCTGCTCGGGCACCCGGCCATCGCGCAGGCCGTGGCGTTCGGGGTGCCCGACGCCAAGTACGGGGAGGAGATCAACTGCGCGGTGATCCCCCGGGAGGGCGTGTCGCTCGGGGAAGAGGAGGTGCTGGCCTACTGCCGGAGGAACCTGGCCGCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_465121.p3 GENE.R_Transcript_465121~~R_Transcript_465121.p3 ORF type:internal len:154 (+),score=-6.28,AMP-binding|PF00501.24|1.7e-28,AMP-binding_C|PF13193.2|8.2e-09 R_Transcript_465121:3-461(+)
EDGARKAGSVGRAVGQEMAILDEEGRRVEAGKSGEVCVRGANVTSGYKGNPEANEAAFRFGWFHTGDIGVVDEEGYLRLVGRIKELINRGGEKISPIEVDSVLLGHPAIAQAVAFGVPDAKYGEEINCAVIPREGVSLGEEEVLAYCRRNLAA

Click here to download the sequence:
Link to NCBI Protein BLAST