Transcript Information: R_Transcript_465208.p1


Annotated TAIR IDAT1G09890.1
Annotated Gene NameRhamnogalacturonate lyase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:3214237-3217386 | Reverse length=617
E-Value8E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17383772337827
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.23319871378329
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.65593734936297
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_465208.p1 GENE.R_Transcript_465208~~R_Transcript_465208.p1 ORF type:internal len:105 (+),score=14.00,Rhamnogal_lyase|PF06045.7|3.5e-35 R_Transcript_465208:3-314(+)
GTAGCTAGAGATTTTCGGGTAATTGTGGATAAACCAGAGCAAATCGAATTGTCATTTAAAATAGGATATGATCCTGCCAAGGCTACACCCAAGGATGTCCCTCTGGAAATTGACCAAAGGTATGTCATGCTTCGTGGAGTATCTGGCCTTTACTCCTATGGAATCTTCGAGAGAGCTGCTTGGCCTGCATTTGGTATGCCTAATGCTAGGCTTGCATTCAAGCTTCAAAGACAAAAGTTTAAGTACTTGGTAATAGCGGATAACAGGCAAAGAGAAATGCCCGTACCCGAGGATCGTCTTAAGCCTAGAGGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_465208.p1 GENE.R_Transcript_465208~~R_Transcript_465208.p1 ORF type:internal len:105 (+),score=14.00,Rhamnogal_lyase|PF06045.7|3.5e-35 R_Transcript_465208:3-314(+)
VARDFRVIVDKPEQIELSFKIGYDPAKATPKDVPLEIDQRYVMLRGVSGLYSYGIFERAAWPAFGMPNARLAFKLQRQKFKYLVIADNRQREMPVPEDRLKPRG

Click here to download the sequence:
Link to NCBI Protein BLAST