Transcript Information: R_Transcript_4653.p1


Annotated TAIR IDAT5G26040.2
Annotated Gene Namehistone deacetylase 2
Annotated Gene Symbol(s)HDA2
Annotation TypeOrtholog
Chromosome Positionchr5:9099321-9101598 | Reverse length=387
E-Value2E-112
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2617254116165
Replicate 20.48378572387784
Replicate 30.42224401098899
Condition 2: 8 Hour
Replicate 11.0155427858304
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.52898173335724
Replicate 20.40654855097838
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4653.p1 GENE.R_Transcript_4653~~R_Transcript_4653.p1 ORF type:5prime_partial len:217 (+),score=32.83,Hist_deacetyl|PF00850.15|2.2e-26 R_Transcript_4653:2-652(+)
CGTATTCTCTCCAGTAATCTCTACTTCGATGTTCCTCTTTCTAAGGCACCGCTGATTTATTCGTCGTCTTATAATATTGCGTTCATGGGAATTGAGAAATTGCATCCATTTGATTCTTCAAAATGGGGTCGCATATGTCTGTTCCTTTCCTCGGAGGGTGTATTGGACAAAAAGCGTATTGTTGAGCCTAAGGAAGCTTCAAGAGATGATCTGTTAGTGGTGCATCTAGAGAAATACTTGGATAGTCTGAAAAACAGTTTGACCGTGGCCACTATTGTGGAGGTGCCACCAGTTGCAATGTTGCCCAATTGCATCGTACAGCAAAAAGTTCTTTACCCTTTCAGAAAGCAGGTTGGGGGATCTATTCTAGCTGCAAAGCTTGCGAAGGAGCGAGGATGGGCAATCAATGTTGGTGGAGGTTTCCATCATTGTTCTGCTAATAAGGGAGGTGGTTTTTGTGCTTATGCTGACATCTCCCTGTGCATTCACTTTGCCTTTATTCGTTTAAATATTTCCAGGGTTATGATTATTGATCTTGATGCACATCAAGGAAATGGTCATGAAACAGATTTTGCTGGAGAAAGTACATTTTTTTCCCTTTCCATTCTAATTGCATTATTTCCTTTGATTTTTAAACAAGTTTCGTTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4653.p1 GENE.R_Transcript_4653~~R_Transcript_4653.p1 ORF type:5prime_partial len:217 (+),score=32.83,Hist_deacetyl|PF00850.15|2.2e-26 R_Transcript_4653:2-652(+)
RILSSNLYFDVPLSKAPLIYSSSYNIAFMGIEKLHPFDSSKWGRICLFLSSEGVLDKKRIVEPKEASRDDLLVVHLEKYLDSLKNSLTVATIVEVPPVAMLPNCIVQQKVLYPFRKQVGGSILAAKLAKERGWAINVGGGFHHCSANKGGGFCAYADISLCIHFAFIRLNISRVMIIDLDAHQGNGHETDFAGESTFFSLSILIALFPLIFKQVSL*

Click here to download the sequence:
Link to NCBI Protein BLAST