Transcript Information: R_Transcript_46576.p1


Annotated TAIR IDAT5G58610.1
Annotated Gene NamePHD finger transcription factor, putative
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23686771-23691053 | Reverse length=1065
E-Value2.3E-133
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5301198469602
Replicate 21.8530886783379
Replicate 33.2698796568568
Condition 2: 8 Hour
Replicate 12.9503306191232
Replicate 22.8315775163435
Replicate 34.1234664187525
Condition 3: 24 Hour
Replicate 13.752887904452
Replicate 23.2498923307681
Replicate 33.5443635371722


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_46576.p1 GENE.R_Transcript_46576~~R_Transcript_46576.p1 ORF type:complete len:1303 (+),score=255.02,Jas|PF16135.1|9.2e-19,Agenet|PF05641.8|1.5e-13,Agenet|PF05641.8|20,Agenet|PF05641.8|1.6e+04,Agenet|PF05641.8|1.6e+04,PHD|PF00628.25|1.2e+03,PHD|PF00628.25|7e-08,PHD|PF00628.25|0.0083 R_Transcript_46576:98-4006(+)
ATGGCGGATTCTTCCGGGTACCCCAGAAAACGTAAACGGAATTCAGTCACTCCTGCCAAACGAAAGCTTCTTAGAGGAGATATAGTTGAGGTTAAGAGTATAGAAGATGGATTCCAAGGATCATGGCATATCGCAGAAATCATTGAGTGTAGGAGTGGCGTTCGAAAAGTTAGGTATAAGGAACTTCTTTGTGATGATGAGTCTGAGTATTTAACTGAATTTATAGAAGTTACTAGCAATGTAGATGGAGTGATTAGTAGCTCAGTGACATCAAATGATTTTCGGGGCAGGATAAGGCCATGTCCCCCAGTTAGGGAGCTGGTGAGAGAGGAAATCTCTTATGGTCTTTGTGTGGACGCTATGATCAACGATGCTTGGTGGGAAGGAGTTGTTTTCGACAGGAGAGATGGTTCAGATAATAGGAATGTATTCTTTCCTGATTTGGGCGACGAGCATAATGTAGAAATCCAAGACTTGCGGATAACTCAAGACTGGGATGAATCTAGTACAGATTGGAAGCCTCGTGGGAATTGGCTGTTCTTAGAGGTCATTGAGGAGTATGAGAGGGATGGGTACATTCCTGTATCTCTTAAGCAAATTTGGTATGATGTGAGGGAAAAAAAGGAATTTTTTAAGGTTGGAGTCTGGGCTTCTTCTGTGAAGTCTCTGTGGGAAAAGCTGATAATGGAGGTCATTGATGTTCATAAGGGGATAACTGTAGATGAGATCTTGGCTTCATGTAAATCTTCAGAAGCCCTGTTGGATAATGGTGAACCCATTTGTGCAGACCAGTTTGCTCTGACATGTGAACCAAATTCAGCCTATTCGTTGGCTGTTGTAGCTCCTATGGATATAGCCCTTCGAGATGCCAATCTGACAACAGAGCATGAAGGCACTATGACAGTGGCTGCTAAAAATGCTGAAATGGCTTTGGATTCACAGGGTATCGCTCCAAGCTCCGGGGAGGCTGTGCCCTCAAGTGATCAGTTGATTCCTGTACAGCCTAGCGCTTTGTCTGTTATTTGTTATGAAGCTCCTTGTTCTGGGGCCAGTAAAAAGCGAGTTGGGAAGCACAAATTGCATAAAAATTCTGGCTCTTATAAGACATCCCAGCGTTCTAAAAAAAGTAAGTTTAACTGGAAGCCTGTTTTGAAGCTCCAGAAGGTGTACAGCCCACACTCTATTTCTGAATATATTCAGAAAGATTATCCTAGCTATCTTACCAAAACTGTTAGGAATCATGTCTTTTGTTTGGGATATAAAGTGGAATCTTCCAGGCAGAGTAATCAATCCCGGGTTCGTTATACCTCTCCTGAAGGGAAAACTTTTTATGATCTTCGTACCTTGTGCAAGTATCTAGAAGAAAATTCTTCCCCTGAAGAGAGTTCTTCTCCTACCACTGAAGATCCTCAGAAAAGGCTCTCTCTGTCTCCTGATAATATGAACTCTGTTCCATTGGTTAATGAACAACGTACAAGTTTTGGGCAACCTGGAAGTGTAGAGAGCGCAGCAACTCTTTTGGCTTGCAAATCTCGTGATCCATGTGTTGTAGCTGAATATTGCCCGCAAGCTGTATTAGAATATGTGGATGCATCTAAAAAACGCTCGGGCTCAAGAGAGCATCTTTCTAAATTGCAAGACAAAGCTAGGAATCACTTGGCTGCCATTGGCTGGGATTTCGCAGTTCTGAAAAAGAGACAAAGCAATGAGTGGCGCTATTACTCGCCTAGCGGAAAGACTTATAATTCTCTGAAGTTAGTATGTAAGGCGATTGCAGAAGGGAATGAGTTAAATGCAAGGGATGATTCTGGCCCAGTTCCAAATGAAGATGTGATGTGCAGTGAGGAATCCAAGGTCCCCTTTGATGGTGAGCTTTCATTGTGTAATGCGGTCACTCAATGCGATTCTGTTTCTCAAAAGCCCAGAACAATCAGAATTAACTGGAAACCTGGAACCTCTGGGGTCAGAAAGGACCAAAAGAAGAAGATTGGCTCAGTATCCTCTTCGTCTTCTCTACTTCATAGTGATGGACAGGACCAGCTATTGGAGGATCATGAGTTTACGCATGGATTGAAGAATGGGGGGCGGCAGTGCTCCAGAAGATTGAGCACCAGCTTCTTATCAAAGAAAAGAAAAGCCTTGAGTAGAGTAAGGCGCACCTCAGATGGTAACAAGTTGACTCGAGTGCTGCGGTCGAGTAAAAGAGTAAGGCAGGCAGGGCCTGTCACTTCGTCTCAAGCTCCTCGTACAGTAATTTCATGGTTGATTGACAATGATGTGTCTTTGGCTAGGACAAAAATAATTTACCGTAGAGAAAGGGATGCAAAGGTAGCAGCTGATGGACGAATAACTCGTGATGGAATAAAGTGCAATTGCTGTGGAGAGGTGTTCTCTCTTAGCGGATTTGGAGCTCATGCTGATAACAATTACCACCGACCAGCAGCAAATCTATTTTTTGAAGATGGGAGGTCTCTTTTGGAATGCCAAATGCAAATGATACGTCAGACTTCCAGACACTCCTCCAGAGAACTGGTTGATAGGGCTAGGGGAGATCATGGAAGCTGGAATGATCATGTTTGTTCGATTTGTCATTATGGTGGAAAATTAATTTTATGTGATAAGTGTCCGTCCTCATTTCATGCAAACTGCCTCAATCTGCAGAAAATTCCTGAAGGTGATTGGTTCTGTCCGTCATGCTGTTGCGCAATTTGTGGTGAAAGCCAATATGATGTCAGTATGGAATTTACTGGGAAAAGCGTCCTCTCTTGCCAGCAATGTGAGAGGCAATATCATGCTCAATGTATAAGAGACCGGGAAATGATTAAGTTGGATGTTCGTCCTATGGAAAATTGGTTTTGCTGTAAAATGTGTGAAAAGGTACACTGGGGTCTCCAGCAGCTTCTTGACAAACCCATTCTTGTTGGTCAGAACAATTTGACCTGGACATTGATGAAACCAATGAACTATGACATCAGTGATCAAGATGATTGTGATATTGTCACCGTAGCAGACAATTATAGCAAGCTTAATGTTGCTCTTGAAGTGATGCATGAATGTTTTGAGCCTGTGAAAGAACCTCTGACAAGGCGAGATCTTGTTGAAGATGTTGTCTTCAGCAGAAGTTCTCATCTTAACAGACTAAACTTCAGAGGATTCTATACTGTGTTACTGGAAAGAAATGATGAGCTGATTAGTGTGGCTAATCTAAGGGTGTATGGAGACAAGGTTGCAGAAATTCCACTTGTTGGTACCCGATTTCAGCATCGTCGGCTTGGAATGTGTCGCGTCTTAATGAATGAGCTTGAGAAGAACCTCAAAAATCTAGGTGTAAACAGGCTGGTTCTTCCTGCAGCTGCAAGTGTTTTGAACACTTGGACTACTTCATTCGGGTTCTCACCAGTGACACAGTCAGATAGAGCTGAATTTCTTGGCTTCACCTTCTTAGAGTTTCAAGATACTGTTATGTGCCAAAAGCTCTTGAGGAAGCTCCCTTTGCTTCTACCACGCTTGTGGAGAGGTTCCCCTGGCATCCATTCTGAACCTCGTCAGAGTATTGAAGGACACAATAGCATCATGGATTTTGAGGGGAACAGCAGCATCTCTGAAGTTCATCAAGGGGAACAACAAGTTGGAGGGAGTGAAAGTGTAGATCAAGGACCACAAGTAATTGGCACTGAAAATAAACACGACAATGGCGGCAATGGTCTGGACTGCCCTGCTCCCATGGACACTGACTCAAGCAAGCAAGCAAGTGAACCATGCCACACCTTGGATTTGATCGATCAGAAGAAGGTGAACAGAGATAAATGTGATGGGACTCTGAAGTTTTACAAAAGAAAGAAAGCCACAGAGCTAAGACCTTCCATTACCCAAGCCGACTGCCCAAAACTCGAAGTTAGTTGTAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_46576.p1 GENE.R_Transcript_46576~~R_Transcript_46576.p1 ORF type:complete len:1303 (+),score=255.02,Jas|PF16135.1|9.2e-19,Agenet|PF05641.8|1.5e-13,Agenet|PF05641.8|20,Agenet|PF05641.8|1.6e+04,Agenet|PF05641.8|1.6e+04,PHD|PF00628.25|1.2e+03,PHD|PF00628.25|7e-08,PHD|PF00628.25|0.0083 R_Transcript_46576:98-4006(+)
MADSSGYPRKRKRNSVTPAKRKLLRGDIVEVKSIEDGFQGSWHIAEIIECRSGVRKVRYKELLCDDESEYLTEFIEVTSNVDGVISSSVTSNDFRGRIRPCPPVRELVREEISYGLCVDAMINDAWWEGVVFDRRDGSDNRNVFFPDLGDEHNVEIQDLRITQDWDESSTDWKPRGNWLFLEVIEEYERDGYIPVSLKQIWYDVREKKEFFKVGVWASSVKSLWEKLIMEVIDVHKGITVDEILASCKSSEALLDNGEPICADQFALTCEPNSAYSLAVVAPMDIALRDANLTTEHEGTMTVAAKNAEMALDSQGIAPSSGEAVPSSDQLIPVQPSALSVICYEAPCSGASKKRVGKHKLHKNSGSYKTSQRSKKSKFNWKPVLKLQKVYSPHSISEYIQKDYPSYLTKTVRNHVFCLGYKVESSRQSNQSRVRYTSPEGKTFYDLRTLCKYLEENSSPEESSSPTTEDPQKRLSLSPDNMNSVPLVNEQRTSFGQPGSVESAATLLACKSRDPCVVAEYCPQAVLEYVDASKKRSGSREHLSKLQDKARNHLAAIGWDFAVLKKRQSNEWRYYSPSGKTYNSLKLVCKAIAEGNELNARDDSGPVPNEDVMCSEESKVPFDGELSLCNAVTQCDSVSQKPRTIRINWKPGTSGVRKDQKKKIGSVSSSSSLLHSDGQDQLLEDHEFTHGLKNGGRQCSRRLSTSFLSKKRKALSRVRRTSDGNKLTRVLRSSKRVRQAGPVTSSQAPRTVISWLIDNDVSLARTKIIYRRERDAKVAADGRITRDGIKCNCCGEVFSLSGFGAHADNNYHRPAANLFFEDGRSLLECQMQMIRQTSRHSSRELVDRARGDHGSWNDHVCSICHYGGKLILCDKCPSSFHANCLNLQKIPEGDWFCPSCCCAICGESQYDVSMEFTGKSVLSCQQCERQYHAQCIRDREMIKLDVRPMENWFCCKMCEKVHWGLQQLLDKPILVGQNNLTWTLMKPMNYDISDQDDCDIVTVADNYSKLNVALEVMHECFEPVKEPLTRRDLVEDVVFSRSSHLNRLNFRGFYTVLLERNDELISVANLRVYGDKVAEIPLVGTRFQHRRLGMCRVLMNELEKNLKNLGVNRLVLPAAASVLNTWTTSFGFSPVTQSDRAEFLGFTFLEFQDTVMCQKLLRKLPLLLPRLWRGSPGIHSEPRQSIEGHNSIMDFEGNSSISEVHQGEQQVGGSESVDQGPQVIGTENKHDNGGNGLDCPAPMDTDSSKQASEPCHTLDLIDQKKVNRDKCDGTLKFYKRKKATELRPSITQADCPKLEVSCR*

Click here to download the sequence:
Link to NCBI Protein BLAST