Transcript Information: R_Transcript_4661.p1


Annotated TAIR IDAT5G26040.2
Annotated Gene Namehistone deacetylase 2
Annotated Gene Symbol(s)HDA2
Annotation TypeOrtholog
Chromosome Positionchr5:9099321-9101598 | Reverse length=387
E-Value1.1E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8855312923411
Replicate 22.5985520317201
Replicate 32.0411944392611
Condition 2: 8 Hour
Replicate 13.8789489025339
Replicate 24.9813845685809
Replicate 35.9307242621066
Condition 3: 24 Hour
Replicate 14.2051429080448
Replicate 23.712271298414
Replicate 35.3093937111781


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4661.p1 GENE.R_Transcript_4661~~R_Transcript_4661.p1 ORF type:3prime_partial len:202 (+),score=34.62,Hist_deacetyl|PF00850.15|1.4e-22 R_Transcript_4661:284-886(+)
ATGTTGACGTCTTCTTCATCTTCGGAAGCTGAAACTATTCGTCGCAGTCGTATTCTCTCCAGTAATCTCTACTTCGATGTTCCTCTTTCTAAGGCACCGCTGATTTATTCGTCGTCTTATAATATTGCGTTCATGGGAATTGAGAAATTGCATCCATTTGATTCTTCAAAATGGGGTCGCATATGTCTGTTCCTTTCCTCGGAGGGTGTATTGGACAAAAAGCGTATTGTTGAGCCTAAGGAAGCTTCAAGAGATGATCTGTTAGTGGTGCATCTAGAGAAATACTTGGATAGTCTGAAAAACAGTTTGACCGTGGCCACTATTGTGGAGGTGCCACCAGTTGCAATGTTGCCCAATTGCATCGTACAGCAAAAAGTTCTTTACCCTTTCAGAAAGCAGGTTGGGGGATCTATTCTAGCTGCAAAGCTTGCGAAGGAGCGAGGATGGGCAATCAATGTTGGTGGAGGTTTCCATCATTGTTCTGCTAATAAGGGAGGTGGTTTTTGTGCTTATGCTGACATCTCCCTGTGCATTCACTTTGCCTTTATTCGTTTAAATATTTCCAGGGTTATGATTATTGATCTTGATGCACATCAAGGAAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4661.p1 GENE.R_Transcript_4661~~R_Transcript_4661.p1 ORF type:3prime_partial len:202 (+),score=34.62,Hist_deacetyl|PF00850.15|1.4e-22 R_Transcript_4661:284-886(+)
MLTSSSSSEAETIRRSRILSSNLYFDVPLSKAPLIYSSSYNIAFMGIEKLHPFDSSKWGRICLFLSSEGVLDKKRIVEPKEASRDDLLVVHLEKYLDSLKNSLTVATIVEVPPVAMLPNCIVQQKVLYPFRKQVGGSILAAKLAKERGWAINVGGGFHHCSANKGGGFCAYADISLCIHFAFIRLNISRVMIIDLDAHQGN

Click here to download the sequence:
Link to NCBI Protein BLAST