Transcript Information: R_Transcript_466107.p1


Annotated TAIR IDAT2G02520.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:676771-678145 | Reverse length=211
E-Value1E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.063159034445394
Replicate 20.14530311706781
Replicate 30.079262067806756
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.062808341247014
Condition 3: 24 Hour
Replicate 10.15887755866923
Replicate 20.22894732412364
Replicate 30.15147200475361


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_466107.p1 GENE.R_Transcript_466107~~R_Transcript_466107.p1 ORF type:complete len:289 (+),score=33.38,zf-RVT|PF13966.2|5e+03,zf-RVT|PF13966.2|1.9e-19,zf-RVT|PF13966.2|1.6e+04 R_Transcript_466107:54-869(+)
ATGGAGGGAGGGATTGGGCTGGTGGATATACATGTGTGGAATATGGCTTTTCTGTGCAAGCGGATTGCTTTGCTTGACACTAAACAAGAAGGGAGTTGGGTCTCATGGTGTGAAAAGTACTATCTCAAAGGGGTGAACTTTTGGCAATACCAGGACAGAAGCAACTCTTCATGGCTTTGGAAGAGACTACAAAAGGTGAAAGAACATCTTATCAAACTGAATGGCAGCGTAGAGCAGGCAGGGGACAATGTTAAAGAATGCTGTAAGAGTGGATCCTTTAAGGTGGGGAAAATGTATGATATAATGAGAGCTCAATCAAGCAGGTGCAGTTGGTCCAGGATACTATGGAAGACCTGTGCTAGGCCTAAGGATCAAGTGATAGCTTGGATGACATTCCACAAAAAGTTGAAGACAAAGAGCATGCTTATGAAGAGGGGGATAATCAGGGATGATACATGTCAATTATGTCAAAAGGCTCCTGAAACTTGTCACCATCTCTTCTTTGAATGTGAAGAAACAAAGATTGTATGGAGACATTTACTACATTGGATACATGCTAGGAGGGGGCCGCTCAGTTTTGGGCATGAGATTAAATGGTTCATTAGGAGGAGAAGGGGTAAGTCTATTTTGCATCATTTGCAAAGATGTGTGTTGATTACAACAGTGGCGGAGCTATGGCATGAGAGGAATATCAGAGGTTTTCAAGGCAAGAAAAGAGATTCACTGATCATTGTAAGACATATTCAGTTTGTATGTTGCCTATTATTGATGTCCAAGTTTGGACAGCAGGCTGAGTCATTTTTGAGCATTATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_466107.p1 GENE.R_Transcript_466107~~R_Transcript_466107.p1 ORF type:complete len:289 (+),score=33.38,zf-RVT|PF13966.2|5e+03,zf-RVT|PF13966.2|1.9e-19,zf-RVT|PF13966.2|1.6e+04 R_Transcript_466107:54-869(+)
MEGGIGLVDIHVWNMAFLCKRIALLDTKQEGSWVSWCEKYYLKGVNFWQYQDRSNSSWLWKRLQKVKEHLIKLNGSVEQAGDNVKECCKSGSFKVGKMYDIMRAQSSRCSWSRILWKTCARPKDQVIAWMTFHKKLKTKSMLMKRGIIRDDTCQLCQKAPETCHHLFFECEETKIVWRHLLHWIHARRGPLSFGHEIKWFIRRRRGKSILHHLQRCVLITTVAELWHERNIRGFQGKKRDSLIIVRHIQFVCCLLLMSKFGQQAESFLSIM*

Click here to download the sequence:
Link to NCBI Protein BLAST