Transcript Information: R_Transcript_466111.p1


Annotated TAIR IDAT5G48470.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19641810-19644127 | Forward length=397
E-Value2.2E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.22239551064226
Condition 2: 8 Hour
Replicate 10.47545368829602
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.22289133230781
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_466111.p1 GENE.R_Transcript_466111~~R_Transcript_466111.p1 ORF type:5prime_partial len:103 (+),score=17.56 R_Transcript_466111:1-309(+)
GAGACAGTATCAAAGGTATTGGGGGGTATCTATGCAGGAAATGTCTCAGGCATTACTGCTCAACATTTAGAATGGGTACCTTTGCTTTTTCTTTCACTTTGTCTATTTTTGAGTGAAGATGGTAAAATGGGTCTTGCTCATCTCATCCTGAAGAGGACATTGAAGTTTGGATTGCTTGTCAAACCTTGGTTGGATTGTTTTGTCTATGCAGATCATGCTCTTTTCAGACTTTTGTCCTCTCTTAGCATCCTTGTGATGTTCTTAAATTTGTTTGCTTGTTCCCTCTTTTTTATCTGTGTTTCTACATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_466111.p1 GENE.R_Transcript_466111~~R_Transcript_466111.p1 ORF type:5prime_partial len:103 (+),score=17.56 R_Transcript_466111:1-309(+)
ETVSKVLGGIYAGNVSGITAQHLEWVPLLFLSLCLFLSEDGKMGLAHLILKRTLKFGLLVKPWLDCFVYADHALFRLLSSLSILVMFLNLFACSLFFICVST*

Click here to download the sequence:
Link to NCBI Protein BLAST